| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4564 |
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| Symbol | |
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| ID | 7973262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4814902 |
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| End bp | 4815966 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795149 |
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| Product | HNH nuclease |
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| Protein accession | YP_002946436 |
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| Protein GI | 239817526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCGCTC GGGCACCCCC ATCTGCGGAC CAGCAACTGG AGTTCTTGAC GAAGCTGCAG
CGTCTTTTTG CCGAGGGCGA TTTCACGGCA ACCTACAAGT TTGCGCTGCT GATCGCGCTC
TCGGACCTTG CCGTGGAGTT GGGGGCTGAC GACGGGGCCG AACTGTCATT GGCGACCCGG
CAGATCGCCG AGCGATTCGT GCAGCTGTAT TGGCGGCATG CGCTGCCTTT TGGGACGGGC
CCGGCCCGCG CGACGCCGGG AGTGCTGGTT CAGAATCTAG GAGTGCAAGC AGCCGTTCTC
ACGGCCATTG AGGAGTTTCG TTCGACATCG AGTTCGACGA CGCTTCAGCA GGCGCGGCGT
GAGGTCGCCT ATGGGCTCTT GCTGGCCAAG GTTGCCGCCG TTGTGTCGGC GCAGCCGCTG
ACCTACCTGC AGAACTTCGG CGGCATCACC GACCCGTTCA TTTATGAGAG GCCGGGTCGG
GGCATCGTGG TGCTCAAGCC GAATGTTGCT TACTGCTTGC GTCGCTTTCA TCCTCTGGTG
CAACAGTTGG CCCGCAATCA CTGGGTGGGT CACGTCAAGG CCAATCGACG AAATCATGGC
ATCTTGGGCG ATGCAGGGGA CCTGGAGGAT TTTCTTTTTG GTATCTCTCG ACAGTCACTA
GCCATCATTG GTGCCGGCCT GCGGAAGTTG GATGGTCCAC GGTGCTTTTA TTGCGGACAG
GGGCTGCACG AGGGCCACGT CGATCACTTC GTTCCGTTCG CGCTCTACCC GCGCGACCTT
GCACACAACT TCGTGTTGGC ACATCCGCAG TGCAATAGGA GCAAGTCGGA TTCTTTGGCC
GGCAAGGGGC ATTTAGTGCG ATGGCTCGAG CGGTTAACCG TGCGCTCACC ACAACTCAGC
GAGATTGGCG CAGTCGCTGG CGTGGTGACT GACGGGGAGG TCGCCCATCG CGTTGCGGCT
TGGGGCTACG CGAACGCCCA TGCAGCGCAG GGGCGTGCTT GGGTCAAGGC CTCGAATTAC
GAGGCTATCG ATTTGGGCTA TTTGCAGTGC CTGGCCAACC CGTGA
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| Protein sequence | MIARAPPSAD QQLEFLTKLQ RLFAEGDFTA TYKFALLIAL SDLAVELGAD DGAELSLATR
QIAERFVQLY WRHALPFGTG PARATPGVLV QNLGVQAAVL TAIEEFRSTS SSTTLQQARR
EVAYGLLLAK VAAVVSAQPL TYLQNFGGIT DPFIYERPGR GIVVLKPNVA YCLRRFHPLV
QQLARNHWVG HVKANRRNHG ILGDAGDLED FLFGISRQSL AIIGAGLRKL DGPRCFYCGQ
GLHEGHVDHF VPFALYPRDL AHNFVLAHPQ CNRSKSDSLA GKGHLVRWLE RLTVRSPQLS
EIGAVAGVVT DGEVAHRVAA WGYANAHAAQ GRAWVKASNY EAIDLGYLQC LANP
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