Gene Vapar_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4506 
Symbol 
ID7972795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp4756388 
End bp4756939 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID644795096 
Producthypothetical protein 
Protein accessionYP_002946383 
Protein GI239817473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.62031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA GCAAGACCAA GAGATCCACG TCCTGGAGCG ACGTCAAGGC CAGACTGATC 
CACTTCGACC ACGATGGACT GGTCGGCCTG GTGCATGACC TGTACACGGC CGACAAGAGC 
ATCCAGATTT TCCTTCACGC CCGTTTCGGG CTGGGCGAAG ATATCCTGGA GCCGTACAAG 
ATCACCATCA GCCGCTGCCT TTGGCCCGAC ATGTTCCGGA ACCAGACCGT GTCCGTCGCC 
GAGGCCAAGA AGGCCATCGC GAATTACAGG AAGGCAATTG GCCAACCGGA GGGCCTCGCA 
GAGTTGATGG TCTTCTACTG CGAGCGCGGA TCAGGCTTCA GCGTTGAAGT TGGCCTGCAG 
GACGAAGACT TTTTCAACGC GTTGGTGCGA ATGTTCGAGC AGGCGTTGAA GGCCATTTCG 
AAACTGCCGG ATGAGCAGCG ACCCTTGCTC ATGGAACGAC TGGAAGCCGT ATGTCGCATC 
AGTCAGAACA TCGGCTACGG CGTCGAGGAT GCCATGAAGG ACCTGCTTGT CGAATACGAC 
ATCTACGATT GA
 
Protein sequence
MKASKTKRST SWSDVKARLI HFDHDGLVGL VHDLYTADKS IQIFLHARFG LGEDILEPYK 
ITISRCLWPD MFRNQTVSVA EAKKAIANYR KAIGQPEGLA ELMVFYCERG SGFSVEVGLQ 
DEDFFNALVR MFEQALKAIS KLPDEQRPLL MERLEAVCRI SQNIGYGVED AMKDLLVEYD 
IYD