Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4505 |
Symbol | |
ID | 7972794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4755961 |
End bp | 4756209 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644795095 |
Product | ISPpu13, transposase Orf3 |
Protein accession | YP_002946382 |
Protein GI | 239817472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTATG ACATGGTCAA GGTCGAAGAG GCGGTTCTGG CGTTGCTCGG CGTCTTTGAG TTCGACAACG GACGCGTATG GAAGCGATAT GACTTCGCAA CCATGGACGG GCTCCACGAA AAAGGGCTCA TCACGGAGGC CCACGGCAGG CAGGAGTCGG TCTACCTGAC GGACGAAGGG ATGCGTCGTG CCAAGGAGCT CGGCGCCAAA TGCTTCGGAA CCAACGGGGC GGCGCCAGTG CGCCAGTAG
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Protein sequence | MGYDMVKVEE AVLALLGVFE FDNGRVWKRY DFATMDGLHE KGLITEAHGR QESVYLTDEG MRRAKELGAK CFGTNGAAPV RQ
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