| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4434 |
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| Symbol | |
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| ID | 7974108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4674573 |
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| End bp | 4675226 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795023 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_002946311 |
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| Protein GI | 239817401 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA GCACCACTTA CACACGTCGC ACCAAGGACC AGCTCGCAGC CCGCGTGGCG
CAGGACATCT TCGACGGCGC CGTCGTCAAC CTGGGCATCG GCCAGCCCAC GCTGGTGGCC
AACCACCTGC CCAAGGGCCG CGAGGTCATC CTGCAGAGCG AGAACGGCAT CCTCGGCATG
GGCCCCGCGC CCGAGGCCGG CGAAGAAGAC TACGACCTCA TCAACGCCGG CAAGCAGCCC
GTCACGCTGC TGCCGGGCGG CTCGTTCTTC CACCATGCCG ACAGCTTCGC GATGATGCGC
GGCGGCCACC TCGACATCTG CGTGCTCGGC GCGTTCCAGG TGTCGGCCAC GGGCGACCTG
GCCAACTGGC ACACGGGCGA GAAAGACGCC ATTCCGGCAG TCGGCGGCGC CATGGACCTG
GCCATCGGCG CCAAGCAGAC CTGGGTCATG ATGGACCTGC TGACCAAGCA GGGCGCAAGC
AAGCTGGTGC AGGAATGCAG CTATCCGCTG ACCGGCATCG CCTGCGTCAA GCGCGTGTAC
TCCGACCTGG CCACGCTCGA ATGCACGCCC GAGGGCCTGA AGCTCGTCGA CCTGGTCGAG
GGCCTCAGCC GCGAAGAGCT CGAAAAGCTG GTCGGCCTGC CGATCGCCGC CTGA
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| Protein sequence | MTMSTTYTRR TKDQLAARVA QDIFDGAVVN LGIGQPTLVA NHLPKGREVI LQSENGILGM
GPAPEAGEED YDLINAGKQP VTLLPGGSFF HHADSFAMMR GGHLDICVLG AFQVSATGDL
ANWHTGEKDA IPAVGGAMDL AIGAKQTWVM MDLLTKQGAS KLVQECSYPL TGIACVKRVY
SDLATLECTP EGLKLVDLVE GLSREELEKL VGLPIAA
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