| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4405 |
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| Symbol | |
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| ID | 7974079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4647705 |
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| End bp | 4648694 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794994 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946282 |
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| Protein GI | 239817372 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACA GACGCCAATT CGTGCAGGCA CTCGGCGGCG CAGCCGCGCT CGGCGCCCTG
CATCCGCTTG CCGCACTCGC CCAGGCCGTG CAGCAGGCCA AGATCTACTA CGGCTTTCCG
GCCGGCAGCG CGGGCGACAG CGTGGCGCGC CGGGTGGCCG AGAAGCTGGG CGACACGCCC
TATTCGAAGA TCAACGCGGT GGTCGAGAAC AAGCCCGGCG CGGGTGGGCG CATTGCGCTC
GACACGCTCA AGGGCTCGCC GGCCGACGGC TCGGTGCTGT GCCTCGCGCA GGCCTCGGCG
CTGTCGACCT ACCCGCACAT CTACACCAAG CTGAGCTACA GCCTTGCCGA TTTCGCGCCG
GTGTCCATCG GCGCCGTGAT GACGCACGGC CTGGCCGTCG GCCCGATGGT GCCGGCCAGC
GTGAAGACGC TGAAGGACTA CATCGCCTGG GCCAAGGCCA ACCCCGACCA GGCCAGCTAC
GGCTCGCCGG GCGCGGGCTC CACGCCGCAC TTCCTGGGCG CGCTGCTGGG CCTGAACACC
GGCACCGACC TGCGCCACGT TCCCTACCGC GGCTCGCTGC CGGCCATCAA TGACGTGGTG
GGCGGGCAGA TCGCCTCGAG CATGACGCCC GTGGGCGACT ACCTGCCCTT TGCCAAGGCC
GGCAAACTGC GCGTGCTCGC CACCTCGGGC GCGCAGCGCG CGGCCTACCT GCCCGACGTG
CCCACCTTCA CCGAACAGGG CTTCCCCGAG ATCGTGGCCG ATGAATGGTT CGGCTTCTTC
GCGCCGGCCA AGACGCCCGC CGCCGTCATT GCCACCGCGA GCACGGCGAT CCAGGCCGCG
CTCAAGGACA AGGCCGTGGC CGAGGGCCTG CTGTCGGTCG GCCTGGTGGC CCACGGTTCC
TCGCCCGAGG ACATGAAGAA ATCGCTCCAG TCCGAATACG AGCGCTGGGG TCCGCTGGTC
AAGAAGATCG GCTTCACCGC CGAGTCCTGA
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| Protein sequence | MTNRRQFVQA LGGAAALGAL HPLAALAQAV QQAKIYYGFP AGSAGDSVAR RVAEKLGDTP
YSKINAVVEN KPGAGGRIAL DTLKGSPADG SVLCLAQASA LSTYPHIYTK LSYSLADFAP
VSIGAVMTHG LAVGPMVPAS VKTLKDYIAW AKANPDQASY GSPGAGSTPH FLGALLGLNT
GTDLRHVPYR GSLPAINDVV GGQIASSMTP VGDYLPFAKA GKLRVLATSG AQRAAYLPDV
PTFTEQGFPE IVADEWFGFF APAKTPAAVI ATASTAIQAA LKDKAVAEGL LSVGLVAHGS
SPEDMKKSLQ SEYERWGPLV KKIGFTAES
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