| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4392 |
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| Symbol | |
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| ID | 7974066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4635410 |
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| End bp | 4636588 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794981 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_002946269 |
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| Protein GI | 239817359 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCA TTTGGCGCAA TAAGTACAGG CCGGCGAATC TGTTGCTGGC GGCCGGCGCG
GCTTTCAGCG GCGCGGCGCA CGCAGTCAAC GATCTGCCCG GCGGCCCCTC GGTGCGCCAG
CTGAATCTTC CGCTGGGCGT CACCAAGATT GCGCAGGAAC AGCATTTCCT GCACACGGTG
ATGATGATCC TGTGCACGGT CATCTTCGTT GCCGTGTTCG CGGTCATGTT CTATTCGATA
TGGAAGCACC GCAAGTCGGT CGGCCACAAG GCGGCCAACT TCCATGAATC GGTGGTGGTC
GAGGTCATCT GGACCATCGT GCCCTTCATC ATCGTGATCG TGATGGCGCT GCCCGCCACC
AAGGTGCTGG TGGCCCAGAA GGACACCACC AACGCCGACC TCACCATCAA GACCACCGGC
TACCAGTGGA AGTGGGGCTA CGACTACCTG AACGGCGAAG GCGAGGGCCT GGCCTTCATC
TCCACGCTCG ACAGCTCGCA GCGCGCCATG TCCGACGCCG GTGCCAAGGG CGCCATGCCC
GACGACTACC TCTTCAAGGT CGACAACCCG ATGGTGGTGC CGGTCCAGAA GAAGGTGCGC
ATCATCACCA CCGCCAACGA CGTGATCCAC GCGTTTGCCG TGCCCCAGCT GGGCATCAAG
CAGGATGCGG TTCCCGGCTT CGTGCGCGAT ACCTGGTTCC GCGCCGAGAC CGTGGGCGAC
TACTACGGCC AGTGCCAGGA ACTCTGCGGC AAGGAACACG CCTACATGCC GATCCACGTG
AAGGTGGTCT CGGCCGCCGA CTACACGGCC TGGGTCGATG GCAAGCGCAA GGAAGCCGCG
GCCAAGCTCG ACGATCCGAG CAAGGTCTGG ACCCTGCCCG ACATGTTGGC GCGCGGCGAG
AAGGTCTATG CCGCCAACTG CGCGGCCTGC CACCAGGCCA ACGGCAAGGG CGCCGGCCCG
ATCAAGCCGC TGGACGCCAG CCCCAAGGTG CTCGACACCG ACCACAAGGT GCAGCTCACG
GTGCTGCTCA ACGGCCAGAA CAATGGCGCG ATGCCCTCCT GGAAGCAGCT GAGCGACACC
GACCTCGCGG CCGTTGCCAC CTACACCAAG AACAGCTGGT CGAACAAGAC GGGCCAGCTG
GTGCAGCCGG CCGAAGTTCT GGCCCTGCGC GGCAAGTGA
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| Protein sequence | MKSIWRNKYR PANLLLAAGA AFSGAAHAVN DLPGGPSVRQ LNLPLGVTKI AQEQHFLHTV
MMILCTVIFV AVFAVMFYSI WKHRKSVGHK AANFHESVVV EVIWTIVPFI IVIVMALPAT
KVLVAQKDTT NADLTIKTTG YQWKWGYDYL NGEGEGLAFI STLDSSQRAM SDAGAKGAMP
DDYLFKVDNP MVVPVQKKVR IITTANDVIH AFAVPQLGIK QDAVPGFVRD TWFRAETVGD
YYGQCQELCG KEHAYMPIHV KVVSAADYTA WVDGKRKEAA AKLDDPSKVW TLPDMLARGE
KVYAANCAAC HQANGKGAGP IKPLDASPKV LDTDHKVQLT VLLNGQNNGA MPSWKQLSDT
DLAAVATYTK NSWSNKTGQL VQPAEVLALR GK
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