| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4383 |
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| Symbol | |
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| ID | 7974057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4628735 |
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| End bp | 4629955 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794972 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_002946260 |
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| Protein GI | 239817350 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.830845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACA CCGGCTCGCT CTACGACCTC ACCCCCGTCG CCTGGCTGAT GGCTGCCGGC
GTGCTGATCG CGCTCGGCCC GCTGGTGTGG GTGTGGCGCC GCAACGCGGG CGCCGGACCG
GCGCGCCGGC TGCACGCGCT CACCGTGCTG ACGCTGTTCC TCACCTTCGA CCTCACGCTG
TTCGGCGCTT TCACCCGGCT CACCGATTCG GGCCTGGGCT GCCCCGACTG GCCGGGCTGC
TACGGCAACG CGAGCCCGGT GGGCGCGCGC CACGAGATCG CCATGGCGCA GTCGGCCCAG
CCGACCGGCC CGGTCACGCA CAGCAAGGCC TGGGTCGAGA TGGTGCACCG CTACCTGGCC
ACCGGCGTCG GCGTGCTGAT CCTCGCGCTG GCGGGCGCGA CCTGGGTCGT GCGCCGGCGC
CAGCGCCGCG CACCGCCCGC GCCGGCGGAC GGCGAGCACG CCACGCTCAG CGCCTGGTGG
CCCGCGCTCA CGCTGGCCTG GGTCTGCCTG CAGGGCGCGT TCGGCGCGCT CACGGTCACC
TGGAAGCTCT TTCCCGCCAT CGTCACGCTG CACCTGCTGG GCGCCGTGGT GCTGCTGGTG
CTGCTGTGCA TCCAGGCGGT GCGCTACCGG CAGGCCGCGG CCGACCGCCT GCCCACGCCC
GTGTCGCCTG CGTTGCGCAG CGGGCTGATC GCCACCTCGG CCCTGCTGCT GCTGCAGATC
GCGCTCGGCG GCTGGGTCAG CACCAACTAT GCGGTGCTGG CCTGCACCCA GTTCCCGACC
TGCCAGGGCA GCTGGTGGCC GCCGATGAAT TTTGCCCAGG GCTTCGAGAT CTGGCGCCAT
CTGGGCGTGA CCGGCAGTGG CGTGCCGCTC GATTTTTCCG CGCTCACCGC CATCCACTAC
GTGCATCGGC TGATGGCCTA CGCCGTGTTC GCCGCGCTGG GCGTGCTCGC GTGGCAGCTG
CGCTGCACCC CGCCGCTGCG GCCGCAGGCG CGCTGGCTCG CGGGGCTCGC GCTGCTGCAG
CTGGCCACGG GCCTCGGCAA CGTGCTGCTC GGCTGGCCGC TGGTCGCCGC GGTCCTGCAC
ACCGGGGGCG CCGCGGCGCT GGCCGTGGTG CTGACATGGG CGCTGTGCGA GAGCCGCCGC
GGGGCTGTGG CCGCGACCGC GCACGAGACA GACAAGGCGC CCGGCGCCCC ACACAACAAC
CAGAGGGAGG CCGCCGCGTG A
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| Protein sequence | MMDTGSLYDL TPVAWLMAAG VLIALGPLVW VWRRNAGAGP ARRLHALTVL TLFLTFDLTL
FGAFTRLTDS GLGCPDWPGC YGNASPVGAR HEIAMAQSAQ PTGPVTHSKA WVEMVHRYLA
TGVGVLILAL AGATWVVRRR QRRAPPAPAD GEHATLSAWW PALTLAWVCL QGAFGALTVT
WKLFPAIVTL HLLGAVVLLV LLCIQAVRYR QAAADRLPTP VSPALRSGLI ATSALLLLQI
ALGGWVSTNY AVLACTQFPT CQGSWWPPMN FAQGFEIWRH LGVTGSGVPL DFSALTAIHY
VHRLMAYAVF AALGVLAWQL RCTPPLRPQA RWLAGLALLQ LATGLGNVLL GWPLVAAVLH
TGGAAALAVV LTWALCESRR GAVAATAHET DKAPGAPHNN QREAAA
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