| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4352 |
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| Symbol | |
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| ID | 7970543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4597244 |
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| End bp | 4598233 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794941 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002946229 |
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| Protein GI | 239817319 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.907997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTGC TCGAAGTCAA AGACCTGCAC GTCGAACTGC AAACGCAGCG CGGCCCCGCC
GAGGCCGTGC GCGGCATCGG CTTCACGCTG GAGCGCGGCG AAACGCTGGG CATCGTGGGC
GAATCGGGCT GCGGCAAGTC GATCACGGTG ATGTCGCTGA TGGGCCTGTT GCCGTCGACC
GCCAAGGTCA GGGGCAGCAT CCGCTTCGAC GGCACCGAGC TCGTCGGCCT CGGCGAAAAG
GCCATGTGCC GGATCCGCGG CAACCGCATC GGCATGATCT TCCAGGAGCC GATGACGGCG
CTGAACCCGG TGCACACCAT TGCGCGCCAG GTCGGCGAGC CGCTGCGGCT GCACCGCGGA
CTCACGGGCG CCGACGCGCG CAAGGAAGTG CTGGCGCTGC TCGATCGCGT GGGCATTCCC
GATGCGGCTT CGCGGCTCGA TGCCTATCCG CACCAGTTCT CGGGCGGGCA GCGCCAGCGC
ATCGGCATTG CCATGGCCCT GGCCTGCGGC CCCGACCTGC TGATTGCCGA CGAGCCCACC
ACTGCGCTGG ACGTCACCAT CCAGAAGCAG ATCCTCGAAC TGATCCAGGG CCTGGTCGCG
GAGCGCGGCA TGGCGCTGAT CCTGATCTCG CACGACCTGG GCGTGATCGC CCAGAGCGTC
TCGAAGATGC TGGTGATGTA CGGCGGCAGC GTGGTCGAGA GCGGCCCGAC CGACACCGTG
TTTGCCGAGC GCGCGCATCC CTACACGCAG GGCCTGTTTG CGGCGCGGCC GGCGCTTGGT
GCGCCGCGCG GCATTCGCCT GGCCACCATC CGGGGCAGCG TGCCCGAGCT GGTCGACCTG
CCGCCGGGCT GCCCCTTCGC GGGCCGCTGC AAGTACACGG TCGATGCCTG CCACACGACG
CGGCCGCCGC CCGCCGTGCT GCGGCACGCG CACGCGGTGC GCTGCATCCG GCTCGAGGAA
ATTGCGGCGG AAGGCGCGCT CGAATCATGA
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| Protein sequence | MPLLEVKDLH VELQTQRGPA EAVRGIGFTL ERGETLGIVG ESGCGKSITV MSLMGLLPST
AKVRGSIRFD GTELVGLGEK AMCRIRGNRI GMIFQEPMTA LNPVHTIARQ VGEPLRLHRG
LTGADARKEV LALLDRVGIP DAASRLDAYP HQFSGGQRQR IGIAMALACG PDLLIADEPT
TALDVTIQKQ ILELIQGLVA ERGMALILIS HDLGVIAQSV SKMLVMYGGS VVESGPTDTV
FAERAHPYTQ GLFAARPALG APRGIRLATI RGSVPELVDL PPGCPFAGRC KYTVDACHTT
RPPPAVLRHA HAVRCIRLEE IAAEGALES
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