| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4273 |
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| Symbol | |
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| ID | 7971357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4514887 |
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| End bp | 4515861 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794860 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946152 |
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| Protein GI | 239817242 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.292182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCC GAGACTTCAT CGCAGCCAGC GCCGGCGCGC TGGCCGCGCC CTGGGCACTG
GGAGCCACGG AGCTGCCCAA GGGCATCGTC AAGATCTACG TGGGCTGGGC GCCCGGCGGC
GGCACCGACG TGTTCGCGCG CATCGTGGGC CAGCAGCTGT CGCAGCTGTG GGGCCGCTCG
GTGGTGGTCG AGAACAAGCC CGGCGCCACC GGCGCGCTGG CCGCGGACTT CTTTGCGCGC
ACCCGCTTCA CCGAGGGCGT GAACCTGCTG ATGGCGCACG TCAACACGCA TGCCATCTCG
CCGCACATCT TCAAGAGCAT CAGCTACGAC CCGCTGAAGG ACTTCGCGCC CATTGCCATG
GTCGGCGCCA CGCCGCACAT ACTGGTGACC CGCGCGAAGA ACTCCGCCGG CTCGGTCAAG
GAAGTGGTCG AGCAGTGCAG GCAAAGCCCG GGGAAGATCA GCTTCGGCTC CTCCGGCACG
GGATCGGTGC AGCACCTAGC GGCCGCGATG TTCAACATGG CGGCCGAGGT CAAGAGCATC
CACGTGCCAT ACAAGGGCTC GGGCCCGATG CAGACGGACC TGATCGGCGG CCAGATCGAC
TACAGCTTCG ACACCATGAC GGCGGCCACG GCGCAGGTCA AGGCCGGGCG CATGGCGGGC
ATCGTGCAGA CGCGCCTGCA GCGCGCCAAG GGCTTTCCGG AGCTGCCGAC CATGGACGAG
CAGGGCTTCA AGGGCTTCGA CGTGTCCAGC TGGTATGGCG TGGTGGGCCC CAGGGACATG
TCCAGGGACC TGGCCCTGCA GATCAACGCC GACATCAACA AGGTGCTGGC GCTGCCCGAT
GTGGTGGCGC GCTTCGACGG CTATGGCGTG GAGGACGGCG GCGGATCGGT CGACAAGTTC
GCGGCCTTCA TGGCTGCCGA GTTCAAGAAA TGGGGCGACG TGGTGCGCAC CGCCAAGGTC
ACAGAGGAGG GCTGA
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| Protein sequence | MKRRDFIAAS AGALAAPWAL GATELPKGIV KIYVGWAPGG GTDVFARIVG QQLSQLWGRS
VVVENKPGAT GALAADFFAR TRFTEGVNLL MAHVNTHAIS PHIFKSISYD PLKDFAPIAM
VGATPHILVT RAKNSAGSVK EVVEQCRQSP GKISFGSSGT GSVQHLAAAM FNMAAEVKSI
HVPYKGSGPM QTDLIGGQID YSFDTMTAAT AQVKAGRMAG IVQTRLQRAK GFPELPTMDE
QGFKGFDVSS WYGVVGPRDM SRDLALQINA DINKVLALPD VVARFDGYGV EDGGGSVDKF
AAFMAAEFKK WGDVVRTAKV TEEG
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