Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4201 |
Symbol | |
ID | 7971938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4444196 |
End bp | 4444381 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794787 |
Product | anti-sigma-28 factor, FlgM |
Protein accession | YP_002946080 |
Protein GI | 239817170 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCTCT CGTCGGGGCA GGTGCATTCG CTGCCCGAGG CGCCCAACTC CGATTTCGAC GCGGCGCGCG TTGCCTCGAT CCGCGAGGAC ATCCGGGCCG GGCGCTATGA AATCCACCCC GACCGGATCG CCCGCGGCCT GCTCGCCAGC GTGCGCGATC TGCTCCACGA AAACGGAAAG CTCTGA
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Protein sequence | MKLSSGQVHS LPEAPNSDFD AARVASIRED IRAGRYEIHP DRIARGLLAS VRDLLHENGK L
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