| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4178 |
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| Symbol | |
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| ID | 7971915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4418923 |
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| End bp | 4419684 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794764 |
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| Product | flagellar biosynthetic protein FliP |
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| Protein accession | YP_002946057 |
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| Protein GI | 239817147 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA CCGTCCGCCA ACGAAGCCTT GCCGGCTTCG CGCTGATGCT GCTCGCCCTC
GCGCTGCCGA CGGCGGCGTC GGCTCAGGGC CTGCCCGGCC TCACCAGCAC GCCCGGCCCG
GGCGGCAGCC AGACCTGGTC GCTCAGCGTG CAGACGCTGG TGATGCTGAC CTCGCTCAGC
TTCCTGCCGG CGCTGCTGCT GAGCATGACG AGCTTCACGC GCATCCTCAT CGTGCTGGGC
CTGCTGCGCA CGGCCATCGG CACGCAGTCG TCGCCGCCCA ACCAGATCCT GGTGGGCCTG
TCGCTGTTCC TGACCTTCTT CGTGATGGCG CCGGTGTTCG ACAAGGTCCA CGACGAGGCC
TACAAGCCTT TTTCCGAGAA CAAGATCACG GCCGAGAAGG CGCTCGAGAA AGGCATTGCG
CCCTTCAAGT CCTTCATGCT GAAGCAGACG CGCGAGAACG ACCTGGCCCT GTTCGCCAGG
CTCGCGAAGA TCCCCGACAT GCAGGGGCCG GAGGAAGTGC CGCTGCGCAT CCTGCTGCCT
TCGTTCGTGA TCAGCGAGCT GAAGACCGCG TTCCAGATCG GCTTCACCAT CTTCATTCCG
TTCCTCATCA TCGACCTGGT GGTGGCCAGC GTGCTGATGT CGATGGGCAT GATGATGGTG
CCGCCCGCCT CCATCGCGCT GCCCTTCAAG CTGATGCTGT TCGTCATGGC CGATGGCTGG
CAGCTGCTGA TCGGCGCACT GGCCCAGAGC TTTTATCTTT AG
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| Protein sequence | MMRTVRQRSL AGFALMLLAL ALPTAASAQG LPGLTSTPGP GGSQTWSLSV QTLVMLTSLS
FLPALLLSMT SFTRILIVLG LLRTAIGTQS SPPNQILVGL SLFLTFFVMA PVFDKVHDEA
YKPFSENKIT AEKALEKGIA PFKSFMLKQT RENDLALFAR LAKIPDMQGP EEVPLRILLP
SFVISELKTA FQIGFTIFIP FLIIDLVVAS VLMSMGMMMV PPASIALPFK LMLFVMADGW
QLLIGALAQS FYL
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