Gene Vapar_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4114 
Symbol 
ID7974436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4354742 
End bp4355302 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID644794700 
ProductFerritin Dps family protein 
Protein accessionYP_002945993 
Protein GI239817083 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCA ATGCTTCCAC CGCCACGGGC GCGGCACAAC ACCAGCGCCT CGTGCTCGAC 
GAGCAGGCCA TCGGCGCCGC CGCCAAGAGC CTCGACGAAG GCGCGGTCAC GCCGAGCTAC
GGCCCCTGGC GCGACGATGT GCTCAAGCTT CTGAACGACG CGCTGGCCAC CGAACTGGTT
TGCGTGCTGC GCTACAAGCG CCACTATTTC ACCGCCAACG GCGTCTCGTC GCCCAAGATC
GCCGAGGAAT TCATGGTGCA CGCCAACCAG GAATCGGCCC ATGCCGACCG CATCGCGGAA
CGCATCGTCC AACTGGGCGG GGAGCCGGAC TTCGCGCCGA CGCACCTGCT CGACCGCAGC
CACGCGAGCT ACGACGAATC CACCGACCTG CAGGCCATGG TGCGCGCCAA CCTCGTGGCC
GAGCGCATCG CGGTGGAAAC GTACCGGCAG ATGATCGCGC TGATCGGCGA CAAGGACCCG
ACCACCCGGC GGATGCTGGA AGACATTCTT TCCGACGAGG AAGAGCACGC GGACGAGCTC
AAGGACTGGC TCGGCCACTG A
 
Protein sequence
MNANASTATG AAQHQRLVLD EQAIGAAAKS LDEGAVTPSY GPWRDDVLKL LNDALATELV 
CVLRYKRHYF TANGVSSPKI AEEFMVHANQ ESAHADRIAE RIVQLGGEPD FAPTHLLDRS
HASYDESTDL QAMVRANLVA ERIAVETYRQ MIALIGDKDP TTRRMLEDIL SDEEEHADEL
KDWLGH