Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4114 |
Symbol | |
ID | 7974436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4354742 |
End bp | 4355302 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644794700 |
Product | Ferritin Dps family protein |
Protein accession | YP_002945993 |
Protein GI | 239817083 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2193] Bacterioferritin (cytochrome b1) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCA ATGCTTCCAC CGCCACGGGC GCGGCACAAC ACCAGCGCCT CGTGCTCGAC GAGCAGGCCA TCGGCGCCGC CGCCAAGAGC CTCGACGAAG GCGCGGTCAC GCCGAGCTAC GGCCCCTGGC GCGACGATGT GCTCAAGCTT CTGAACGACG CGCTGGCCAC CGAACTGGTT TGCGTGCTGC GCTACAAGCG CCACTATTTC ACCGCCAACG GCGTCTCGTC GCCCAAGATC GCCGAGGAAT TCATGGTGCA CGCCAACCAG GAATCGGCCC ATGCCGACCG CATCGCGGAA CGCATCGTCC AACTGGGCGG GGAGCCGGAC TTCGCGCCGA CGCACCTGCT CGACCGCAGC CACGCGAGCT ACGACGAATC CACCGACCTG CAGGCCATGG TGCGCGCCAA CCTCGTGGCC GAGCGCATCG CGGTGGAAAC GTACCGGCAG ATGATCGCGC TGATCGGCGA CAAGGACCCG ACCACCCGGC GGATGCTGGA AGACATTCTT TCCGACGAGG AAGAGCACGC GGACGAGCTC AAGGACTGGC TCGGCCACTG A
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Protein sequence | MNANASTATG AAQHQRLVLD EQAIGAAAKS LDEGAVTPSY GPWRDDVLKL LNDALATELV CVLRYKRHYF TANGVSSPKI AEEFMVHANQ ESAHADRIAE RIVQLGGEPD FAPTHLLDRS HASYDESTDL QAMVRANLVA ERIAVETYRQ MIALIGDKDP TTRRMLEDIL SDEEEHADEL KDWLGH
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