| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4089 |
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| Symbol | |
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| ID | 7974411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4334469 |
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| End bp | 4334942 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794675 |
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| Product | putative lipoprotein |
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| Protein accession | YP_002945968 |
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| Protein GI | 239817058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCGG CACTGCTGGC GGGTGTGATC GGGCTTGCGG GCTGCGACAA CCAGCGCATC
AGCGAACTGG AAGAAGGCGT CTCCACCGAA GCCGACGTGC GCGCCAGGTT CGGCCAGCCC
GAGAACATCT GGGACGCGCC CGGCGGCCGC GTGTTCGAGT ACAACCGCCA GCCGCAGGGC
CAGAAGAACT ACATGATCAC CATCGGCGCC GACGGCAGGA TGAGCGCGCT GCGCCAGGTG
CTGACGCCCG AGAACTTCGC CAAGGTGCAG CCGGGCATGA TGATGGAAGA CCTGCGCAAG
ATGCTCGGCA AGCCCGCGAA GATCACGCCC TATGCACTCA AGCGCGAAAC CGAGTGGGAG
TGGCGCTGGG TCCAGCCGCC GAATTCGCCC ATGGTGTTCA CGGCCACCCT CAACGACGAC
CAGCGCGTGG TGCGCAGCGG CTCTTCGCCC GACCGGAGCA CCGAGGCCAA CTAG
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| Protein sequence | MAAALLAGVI GLAGCDNQRI SELEEGVSTE ADVRARFGQP ENIWDAPGGR VFEYNRQPQG
QKNYMITIGA DGRMSALRQV LTPENFAKVQ PGMMMEDLRK MLGKPAKITP YALKRETEWE
WRWVQPPNSP MVFTATLNDD QRVVRSGSSP DRSTEAN
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