| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4057 |
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| Symbol | |
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| ID | 7974379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4300301 |
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| End bp | 4301173 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794644 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_002945937 |
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| Protein GI | 239817027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACGC CGCTGCCGTT GCCGCTCCCG CGTCTCACCC AGGCCCGCGC CGCGCTGACG
CGCGAAGTCG AGGTCGTCGA TGAGCATGGC GCGCGCGGCA CCGTCTCCAT TCCCGCCGAG
CGCGACCTCA CGGTGTACGT GGACCGGCGC GAACTCGTCA CGCTGATGAC GCTCGGCGCC
CAGCCCGAAC TGCTGGTGCT GGGCTACCTG CTGAACCAGC GCCTGATCGA AGCGGCCAGC
GACGTCGAGT CGGTCACGGT CGACTGGGAG GTGGGTGCCG CCGCGGTCAA GACGCATGCC
GGCATCGACC GCATCGAGGA GCGCACCGCC AAGAAGGTGG TGACCACCGG CTGCGGCCAG
GGCAGCGTGT TCGGCGACCT GATGGCCGAC ATCGACAAGC TCGAGCTGCC GCCCACGCGC
ATGACGCAGG CCCAGCTCTA TGCGCTGGTC AACGCGATCC GGCTCCAGGA GAGCACCTAC
AAGTCGGCCG GCTCGGTGCA CGGCTGCGCG CTGTTCACGC TCGAGCCCGG CGGCACCGAG
GCCACGATGC ACTCCTTCGT GGAAGACGTG GGCCGCCACA ACGCCATCGA CACCATTGCG
GGCTGGTGCG CCATGCAGCC GCCCGGCGCG CTGGCCGGCG ACCGCGTTTT CTACACCACC
GGCCGGCTCA CGAGCGAGAT GGTGATCAAG TCGGCGCAGA TGGGCGTGCC GATCGTGGTC
TCACGCAGCG GCATCACGCA GATGGGCCAC GACGTGGCCA CGCGCGTGGG CCTGTGCGCC
ATCGGCCGCG CGACCAACCG GCACTTCGTC TGCTACGCGG GCGTCGACCG GCTGGTGCTG
CAGCCGGAAC TCGCGCGCCG CAATCCCGCC TAA
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| Protein sequence | MTTPLPLPLP RLTQARAALT REVEVVDEHG ARGTVSIPAE RDLTVYVDRR ELVTLMTLGA
QPELLVLGYL LNQRLIEAAS DVESVTVDWE VGAAAVKTHA GIDRIEERTA KKVVTTGCGQ
GSVFGDLMAD IDKLELPPTR MTQAQLYALV NAIRLQESTY KSAGSVHGCA LFTLEPGGTE
ATMHSFVEDV GRHNAIDTIA GWCAMQPPGA LAGDRVFYTT GRLTSEMVIK SAQMGVPIVV
SRSGITQMGH DVATRVGLCA IGRATNRHFV CYAGVDRLVL QPELARRNPA
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