| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4027 |
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| Symbol | |
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| ID | 7974592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4270776 |
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| End bp | 4272191 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794613 |
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| Product | histidine kinase |
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| Protein accession | YP_002945907 |
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| Protein GI | 239816997 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0361881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATC CGTCGATCGC GAGCGTGACA CCGGTCCCGG CTTCGGCCGA CGAAGCTGAA
TCCTGGGTAC GCGGCGAGCT GATCCGCAGC CTCATGCGCT CCGCGCGCGG GTCCTACATT
GTTTCGGCGG CGCTCATGCC GGGGATGGTC GGCCTGAACT GGAGCTATGT GCCCCGATGG
GAACTGCTGA CCTGGCTTGC CGCGGGCCTC ATTGCCACGG CTTGCCGGGC CTGGGGCGCC
AGGGTCTATG CCGTGCGCTA CGCCGGCCGG AGCGCGGCGG CGCAGCAGCA GTTCACCGAA
CGCTATGGCT TCATCTGGAG CACCAGCGCG GTGGTCTGGG GCCTGTCGAT CCTGCTGTTC
TTCGAGCGCA CGCCGCAGGT CAACCAGTTC ATGAGCTGGC TCATCGTGGC CGGCGTCGGC
ACCTTTCCGC TCAACGGGCT GGCGCTGCAT CCACCGCTGC TCAAGCGCTA CGTCAACACG
CTGTTCATCA CGATGCTGGG GGCGGTTCTG ATCCGGCTCG TGAGCATCAA CCTCGTGGAG
CCGCATTTCC AGTACGGCTT CCTGATGCCG ATCCTGCCGA TCCTGCACTG GTTCCTGCTG
CTGCGCGCGG GGCGCCACAT CCACGAGACG GCGCGCAACA GCCTGGAGCT GCTGTTCCAC
AACCACATCC TGATCAAGTC GCTCACGCAG CAGCGGCAGG CCGCGGTGGC GGCCGTGGCC
ATGAAGAACC GCTTTCTCGC GAGCGCCGCG CACGACATGC GCCAGCCGGT GCTGGCCCTG
TCGCTCTACG CCGATTGGCT GCGCAACGAG CCCGAACTGG TGCTGGAACT CGCACCCAAG
ATCGTTCGCG CCACGCACGC GGTGAACGCG CTGTTCGATT CGATGTTCGA CCTCGCGCGC
ATCGATTCGG GCCAGGTGCG CCTGCACATC GAGCGCGTGG ACGTGGCCGA ACTGCTGCAT
GACCTGGAAC TGCAATACCG CCCGGTAGCG GAAAGCCGGG GGCTCGATTT CCGGGTGCAC
GTGACCGAGG GCAGCTTCCT GACCGACCCG ATCCGGGTGC GCCGCATGCT CGGCAACCTG
CTGGCCAACG CGATCAAGTA CACCACCGAC GGCGGCGTGC TGCTGGCCTC GCGGCAGACG
CGCGACGGCC TGCGCGTGGA GGTGTGGGAC ACCGGCATCG GCATTGCGCC CGAACACCTG
CGCGACGTGT TCCTGGAGTT CTACAAGGTG GCCGACCACG CCGGCACCTC CGACGGCTTC
GGCCTGGGCC TGGCCATCGT CGCGCGCCTC TCGCACGTGC TGGGCCATCC CGTCAGCGTG
CGCTCCCGCC TCGGCAGCGG CAGCGTGTTC CGCGTCGCCC TGCACGACGC CGACGAAGCC
GTGGCCCAAG CCCGCGTCAG CGCCTCCGGC GGCTGA
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| Protein sequence | MANPSIASVT PVPASADEAE SWVRGELIRS LMRSARGSYI VSAALMPGMV GLNWSYVPRW
ELLTWLAAGL IATACRAWGA RVYAVRYAGR SAAAQQQFTE RYGFIWSTSA VVWGLSILLF
FERTPQVNQF MSWLIVAGVG TFPLNGLALH PPLLKRYVNT LFITMLGAVL IRLVSINLVE
PHFQYGFLMP ILPILHWFLL LRAGRHIHET ARNSLELLFH NHILIKSLTQ QRQAAVAAVA
MKNRFLASAA HDMRQPVLAL SLYADWLRNE PELVLELAPK IVRATHAVNA LFDSMFDLAR
IDSGQVRLHI ERVDVAELLH DLELQYRPVA ESRGLDFRVH VTEGSFLTDP IRVRRMLGNL
LANAIKYTTD GGVLLASRQT RDGLRVEVWD TGIGIAPEHL RDVFLEFYKV ADHAGTSDGF
GLGLAIVARL SHVLGHPVSV RSRLGSGSVF RVALHDADEA VAQARVSASG G
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