| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4023 |
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| Symbol | |
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| ID | 7974588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4267226 |
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| End bp | 4267861 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794609 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_002945903 |
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| Protein GI | 239816993 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.708283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGT ATTTCGAAGT CCACCCCGAG AACCCGCAGC AGCGGCTGCT CAAGCAGGCC
GCCGCGCTCT TGCAGCGCGG CGAGATCGTG GCCGTGCCCA CCGATTCGAG CTACGCGCTG
GCCTGCCACC TCGACGACAA GGACGCGGTC GACCAATTGC GCCGCATCCG CCAGGTCGAC
GAGAAGCACC ATCTCACGCT GCTGTGCCGC GACCTGAGCG AGCTGGCCAA CTACGCGCGC
GTCGACAACA AGCAGTACCG GCTGCTGAAG GCCGCGACGC CCGGGCCCTA CACCTTCCTG
CTCGAGGCCA CCAAGGAAGT GCCGCGGCGC GTGAGCCATC CGCAGCGCAA GACCATCGGC
CTGCGCGTGC CCGACCACAA GGTGCTGCTC GAGCTGCTGA TGCTGCATGG CGCGCCGCTT
CTGGCCACCA CCTTGATCGC GCCCGGCGAG ACCGAGGCGC TGAACGACGC GCAGACCATC
CGCGAGCGCT TCGAAAAGCA GATCGGCGCC GTCATCGACG CCGGCGCCTG CCCTTCGCAA
CCCACCACCG TGGTGGACCT CACGCCCATG GGCACGGGCG ACGATCCGGT GGTGGTGCGG
CAGGGCCGCG GCACGCTGGC GGTGCTTGGC CTCTGA
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| Protein sequence | MAQYFEVHPE NPQQRLLKQA AALLQRGEIV AVPTDSSYAL ACHLDDKDAV DQLRRIRQVD
EKHHLTLLCR DLSELANYAR VDNKQYRLLK AATPGPYTFL LEATKEVPRR VSHPQRKTIG
LRVPDHKVLL ELLMLHGAPL LATTLIAPGE TEALNDAQTI RERFEKQIGA VIDAGACPSQ
PTTVVDLTPM GTGDDPVVVR QGRGTLAVLG L
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