| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3873 |
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| Symbol | |
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| ID | 7969730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4102640 |
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| End bp | 4103875 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794459 |
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| Product | Acyl-CoA dehydrogenase type 2 domain protein |
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| Protein accession | YP_002945753 |
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| Protein GI | 239816843 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAC TCCCCTTGCG CCGCCCGCCG GCCACGAATG AAGACCATCC CACGCCTGCC
ACCGTCGATG CCGCATTGCT CGCGCATCTG TCGGCGCAGT TCGCCGCCAC CGCGGCCGAC
CACGACCGCA GCGGCGCCTT TCCGCATCCG AACTTCGCGG CCTTGCAGTC GCACGGCCTC
GTCGGCCTGG TGGCGCCCGC GGCGCATGGC GGCGGCGGCG CCACGCTGGC CACGGCACGG
CGCGTGATCG CGGCCGTGGC GCGCGGCGAG CCGGCCACCG CGCTGATCCT GACGATGACC
TACCTGCAGC ACCACGCACT CGCGCGCAGC GACAGCCGCT GGCCGCCGCA CTTGCGCGAA
CGCGTGCTGC GCAGCGCAGT GGAACGCGGC GCGCTCATCA ATGCGCTGCG CGTCGAGCCC
GCGCTCGGCT CGCCCGCACG CGGCGGGCTG CCCGCGACGG TCGCGCGCCG CGAAGGCGGC
GGCTGGAGGA TCGATGGCCA CAAGCTCTAC ACGACCGGCA TCGAAGGCTT GTCGTGGCTC
GCCGTGTGGG CCCGCACCGA CGAGGCCGTG CCGCGCACCG GCGTGTTCCT GGTGCCGCGC
CATGCACCCG GTGTGCGCGT GATCGCGAGC TGGGACCATC TGGGCCTGCG CGCCTCGGGC
AGCCACGAGG TGGTGTTCGA GAACGTGGCG ATCGAGCTCG ACCACGCGGT CGACCTTCGC
GCCCCGGCCG ACTGGGCACC CGATGCCGGC AGCCAGACCG ACATCGACGC CCACGCCGCG
CAGCAGGCCT GGATGACGGT GCTGCTCGGC AGCCTCTACG ACGCGGTGGC GCAGGCCGCG
CGCGGCTGGC TGGTGAGCTT CCTGAACCAT CGTGCGCCCG GCAGCCTGGG TGCGCCGCTC
GCGAGCCTTG CGCGCGTGCA GGAGCATGTG GGAGAGATCG AGGCGCTGCT TCGCACCAAC
CGCGTGCTGC TCGACGATGC GACGCGCGCC GTCGACGAAG GCCGCGCGCA GCCGGCCGCC
GACAGCGGCC TGCTCAAGTA CACCGTGACG GGCAACGCCA TCCGTGCGGT CGAACTCGCG
CTGCAACTCA GCGGCAACCA CGGCCTCGCG CGGCAGAACC CCCTCGAGCG GCACTACCGC
GACGTGCTGT GCAGCCGCAT CCACACGCCG CAGAACGACG CGGTCCTGGT TGCGGCGGGC
AAGCGCGCAT TGCTTTCCGA GGGGGCCGCC GCATGA
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| Protein sequence | MSALPLRRPP ATNEDHPTPA TVDAALLAHL SAQFAATAAD HDRSGAFPHP NFAALQSHGL
VGLVAPAAHG GGGATLATAR RVIAAVARGE PATALILTMT YLQHHALARS DSRWPPHLRE
RVLRSAVERG ALINALRVEP ALGSPARGGL PATVARREGG GWRIDGHKLY TTGIEGLSWL
AVWARTDEAV PRTGVFLVPR HAPGVRVIAS WDHLGLRASG SHEVVFENVA IELDHAVDLR
APADWAPDAG SQTDIDAHAA QQAWMTVLLG SLYDAVAQAA RGWLVSFLNH RAPGSLGAPL
ASLARVQEHV GEIEALLRTN RVLLDDATRA VDEGRAQPAA DSGLLKYTVT GNAIRAVELA
LQLSGNHGLA RQNPLERHYR DVLCSRIHTP QNDAVLVAAG KRALLSEGAA A
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