| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3811 |
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| Symbol | |
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| ID | 7969668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4026469 |
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| End bp | 4027461 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794397 |
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| Product | molybdopterin dehydrogenase FAD-binding |
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| Protein accession | YP_002945691 |
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| Protein GI | 239816781 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.332068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCT TTGCATTCAC CCGCGCCACC GACGTGGACA CGGCCGTTCG GGCGGCCACG
CAGCCCGGCG CCCGGTTCCT GGCCGGCGGC ACCAACATCG TCGACCTGAT GAAGGAAGGC
GTGGAAGCGC CCGATCAGCT GGTGGACATC AACCGCCTGC CGCTCGCGGC CATCGAGGCG
CAACCTGGTG GCGGGCTTCG GCTGGGCGCG CTGGCGCGCA ACAGCGACAC GGCCAGCCAC
CCCGTGCTGC GCACGCGCTA TCCGCTGGTG GCGCAGGCCA TTCTTGCGGG CGCCTCGGGC
CAGCTGCGCA ACGCGGCCAC CAACGGCGGC AACCTGCGCC AGCGCACGCG CTGTCCCTAC
TTCTACGACG TGACCCAGCC CTGCAACAAG CGCGAGCCGG GCACGGGCTG CAGCGCGCTG
CAGGGCTTCA ACCGCAACCA CGCGGTGCTG GGCACCAGCG CGAAGTGCAT CGCGAGCTAT
CCGGGCGACA TGGCGCAGGC GCTGCACGCG CTCGATGCGG TGGTGCAGCT GCAGGGGCCC
TCAGGCCGCA GGACCATTCC GATTGCGCAG TTCCACCGCC TGCCGGGCGA GACGCCCGAG
CTCGATGCCA ACCTGGCGCC CGGCGAGCTG ATCACCGCCA TCGACCTGCC GGCCGAAAGC
GCCCGCTTCG CACAGCGCTC GCATTACCTG AAGGTGCGCG ACCGCGCCAG CTATGCCTTT
GCGCTGGTGT CGGTGGCGGC CGCGCTCGAC ATGGAGGGCA GCCGCATCCG GCAGGCGCGC
ATCTGCCTGG GCGGCGTGGC GCACATGCCC TGGCGCGCGC GCGGGGCCGA GGCGCTGCTG
CAAGGCGCCG AGCCCAGCAT GGCGCTGTTC CGCCAGGCGG CGGAGGCTGC GCTGGCCGGT
GCCACGGGCT TCGAGCACAA CCGTTTCAAG ATCGAATTGG CCAGGCGAAG CATCGTGCGC
GCGCTGGAAA CCACGAGCAG GAGCACGGCA TGA
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| Protein sequence | MKPFAFTRAT DVDTAVRAAT QPGARFLAGG TNIVDLMKEG VEAPDQLVDI NRLPLAAIEA
QPGGGLRLGA LARNSDTASH PVLRTRYPLV AQAILAGASG QLRNAATNGG NLRQRTRCPY
FYDVTQPCNK REPGTGCSAL QGFNRNHAVL GTSAKCIASY PGDMAQALHA LDAVVQLQGP
SGRRTIPIAQ FHRLPGETPE LDANLAPGEL ITAIDLPAES ARFAQRSHYL KVRDRASYAF
ALVSVAAALD MEGSRIRQAR ICLGGVAHMP WRARGAEALL QGAEPSMALF RQAAEAALAG
ATGFEHNRFK IELARRSIVR ALETTSRSTA
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