| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3787 |
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| Symbol | |
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| ID | 7970947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4002529 |
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| End bp | 4003191 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794373 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945668 |
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| Protein GI | 239816758 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA ACATCGCCCC CATCCTCCCC GAGCTGTGGG TGGCCACGGG CCAGACCTTC
ATGATGCTGG CCATCGGCCT TTCGGCCGCG GTGCTGATCG GCGGCCCGCT GGGCATCCTG
CTGTTCCTGC TGGGGCCGGG CCAGTCGCTC GAGAACAAGC CGGCGTTCCT GGTGCTCAAC
TGGATCGTGA ACACCGTGCG CTCGTTTCCT TTCATCATCC TGCTGGTGGC GCTGGTGCCG
TTCACGCGGG TGATCGCGGG CACCTCCATC GGCCCGCTGG CGGCCGCGGT GCCGCTGTCG
TTCGCGGCCA TTCCGTACTT TGCGCGGCTG GTCGACCAGT GCCTGCGCGA AGTGCCGCGC
GGCGTGATCG AGGCGGCGCA TGCCATGGGC GCCTCGGAGC TGCAGATCGT CTGGCGCGTG
CTGGTGGTCG AGGCGCGCTC CGGATTGGTG CTGGCGCTCA CGGTGCTGGC GGTGAGCTTT
CTTTCCTACT CGGCGATTGC CGGCGTGGTG GGCGGCGGCG GCATCGGCGA CCTGGCCATC
CGCTATGGCT ACTACCGCTT CCAGACCGAC GTGATGGTGC TCACCGTGGC GCTGCTCGTG
GTGCTGGTGC AGATCCTGCA GTTCGTGGGC AACACCACGG CGCGCAGGCT GGACAAGCGT
TGA
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| Protein sequence | MFENIAPILP ELWVATGQTF MMLAIGLSAA VLIGGPLGIL LFLLGPGQSL ENKPAFLVLN
WIVNTVRSFP FIILLVALVP FTRVIAGTSI GPLAAAVPLS FAAIPYFARL VDQCLREVPR
GVIEAAHAMG ASELQIVWRV LVVEARSGLV LALTVLAVSF LSYSAIAGVV GGGGIGDLAI
RYGYYRFQTD VMVLTVALLV VLVQILQFVG NTTARRLDKR
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