Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3782 |
Symbol | |
ID | 7970942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3999539 |
End bp | 4000177 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644794369 |
Product | hypothetical protein |
Protein accession | YP_002945664 |
Protein GI | 239816754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.752159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTCA TTCCACTGCG CCCCGCCCTT GCGGCAGCCG CCGCGCCGGT TCATCTTGTG GGCCGGCTGT CGGCCGCACT GCCCGATGCG CACTTCGATG TCGAAGACGA GGACGGCGGG ACCTGGCGCT GCCGCCGGGC CGCCAGTTGC CTGCTGCGGC CCGAGGTGGG CGACACCGTG CTGCTGTCCG GACCGGACGG AGCCCGGGTG TACCTGATTG CCGTGCTCGA ACAGGCCGAC GGCGCGGTCA GCCGCATCGA AACCTCAGGC GCCCTCTCGA TCGAAAGCCC CGGCGACGTG CGGCTGTGCA GTGGCGGCGA GCTCCAGATG CACGCCGCGC AATGGAAGCT CCAGGCCGCG AGCGGACAGT GCCGCGTCGA CGACCTGCAC TTCACCGGCC AGGCCCTCGA CGCCACGGTG GGGCGGCTGC GGCTGGTCGG GCGTGTCTTC GAATCGGTGG CCGATCGCAT CGTGCAGATG GCGCGCAACG CGCTGCGCGT GGTGGACGAG ACCGAGCAGG TCCGCGTGGG CCACCTCGAC TGCGAAGCCG GCGGCACGGC GCGCCTGCAT GCCCGGCACA CGGTGGTCAC GGCCAGCGAG CTCGTGAAGG TCGACGCCGC GCAGATCCAC ATGGGCTGA
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Protein sequence | MNVIPLRPAL AAAAAPVHLV GRLSAALPDA HFDVEDEDGG TWRCRRAASC LLRPEVGDTV LLSGPDGARV YLIAVLEQAD GAVSRIETSG ALSIESPGDV RLCSGGELQM HAAQWKLQAA SGQCRVDDLH FTGQALDATV GRLRLVGRVF ESVADRIVQM ARNALRVVDE TEQVRVGHLD CEAGGTARLH ARHTVVTASE LVKVDAAQIH MG
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