| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3645 |
|---|
| Symbol | |
|---|
| ID | 7970720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 3849849 |
|---|
| End bp | 3850121 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644794230 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002945528 |
|---|
| Protein GI | 239816618 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG AAATCTCCAA GGAAGCCCGC CAGCAGGCCA TCGCGTCGAT CGAGCGCTAC
TTCAACGAGA ACATGGAAGA GAAGATCGGC AACATCGCGG CCGGCGCGCT GCTCGGCTTC
TTTCTTGAAG AGGTCGGCCC CATCGTCTAC AACAAGGCCG TGGCCGACGT GCAGGAGCGG
CTGCAGTCGC GCATCTCGGA GGTCGACCTC GAAGTGCACG AGGACGAGTT CCAGTACTGG
CGCAAATTCG ATCGGCAGAA AAAGAGCCGG TAG
|
|---|
| Protein sequence | MTIEISKEAR QQAIASIERY FNENMEEKIG NIAAGALLGF FLEEVGPIVY NKAVADVQER
LQSRISEVDL EVHEDEFQYW RKFDRQKKSR
|
|---|
| |