Gene Vapar_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3643 
Symbol 
ID7970718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3848492 
End bp3849289 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID644794228 
Productenoyl-CoA hydratase 
Protein accessionYP_002945526 
Protein GI239816616 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACA CACGCTACCA GACCCTTGCC ATCACGCGCC GCGGCGCCCA TGGCGCGGTG 
CTCGACATCC AGATGCGCGC GGCCAACGGC AAGCTGCCCA CGGCCGGCCA CGACGGCCAC
CGCGAACTGG CCGAGATCTG GCGCGACGTG GCGGCCGACG ACACGGTGCG CTGCGCGGTG
CTGCGGGGCG AGGGGCTGGG CTTCTCGGGC GGCGGCGACC TGGCCATGGT GCAGGACATG
ACCACCGACG ACGCGGTGCG CCAGCGCGTC TGGAAAGAGG CGCGCAACCT GGTCTACAAC
ATCATCAACT GCGACAAGCC CATCGTGAGC GCCATGCACG GCCCGGCCGT GGGCGCGGGC
CTGGTGGCGG GGCTTTTGGC CGACATTTCG ATTGCCGCCA GGGACGCGAA GATCGTCGAC
GGCCACACGC GCCTGGGCGT GGCGGCGGGC GACCACGCGG CCATCATCTG GCCGCTGCTG
TGCGGCATGG CCAAGGCCAA GTACCACCTG CTGCTGTGCG AGCCGGTGAG CGGCGCGGAG
GCCGAGCGCA TCGGCCTGGT GTCGCTCGCG GTGGACGAGG CCGAGCTGCT GCCGCGCGCC
TACGAGGTGG CCGACCGGCT CGCGGTCGGC AGCCAGGGCG CGATCCGCCT GACCAAGTAC
GCGCTCAACA ACTGGCTGCG CCAGGCCGGC CCGGCCTTCG ACGCCTCGCT GGCGCTCGAA
TTCATGGGCT TCGCGGGCGC CGACGTGCGC GAGGGCGTGG CCTCGCTGCG CGAGCGGCGC
GCGCCGAACT TCGGCTGA
 
Protein sequence
MEYTRYQTLA ITRRGAHGAV LDIQMRAANG KLPTAGHDGH RELAEIWRDV AADDTVRCAV 
LRGEGLGFSG GGDLAMVQDM TTDDAVRQRV WKEARNLVYN IINCDKPIVS AMHGPAVGAG
LVAGLLADIS IAARDAKIVD GHTRLGVAAG DHAAIIWPLL CGMAKAKYHL LLCEPVSGAE
AERIGLVSLA VDEAELLPRA YEVADRLAVG SQGAIRLTKY ALNNWLRQAG PAFDASLALE
FMGFAGADVR EGVASLRERR APNFG