| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3620 |
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| Symbol | |
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| ID | 7970695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3829460 |
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| End bp | 3830440 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794205 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002945503 |
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| Protein GI | 239816593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CAACACCCGC TCGCTGGCTG CGCCGCGGCG TCGCCGCACT GGCCGGCAGC
CTGCTGATGC TTTCGTTTTC TTCCACGGCG CAGGCCGGCG CTCCGCAGGT CAAGACCCAG
GCGCCGGGCT TCTACCGCAC GATGCTCGGC GACTTCGAGG TGACGGCGTT GTTCGACGGC
ACCATCGACC TCGAGCCCAA GAAGCTGCTC ACCAACACCA CGCAGGCACA GATCGGCAAG
CTGCTCGATC GCGGCTTCGA GAAGGACACC GTGCCCACCT CGGTGAACGC CTATCTCATC
AACACCGGCA GCAAGCTGGT GCTGGTCGAC ACGGGTGCCG GCGGCCTGTT CGGCCCCACG
CTCGGCAGCC TGCAGGCCAA TCTCAAGGCC GCGGGCTATC AGCCCGAGCA AGTCGACGAC
GTGCTCATCA CCCATATGCA CGGCGACCAT GTCGGCGGCC TGGTGCAGGA CGGCAAGCTG
GTGTTCCCCA ACGCCACCAT CCACGCCGGG CAGGAAGACG CCGACTTCTG GCTCGACAAG
GCCAACCTGG AGAAGGCTTC CGCCGAGATG AAGGGCTTCT TCCAGGGGGC GATGGCCTCG
CTGAACCCGT ATGTGGAGGC CGGCAAGTTC AAGGGCATGA AGGGCAACAC CGACCTGGTG
CCCGGCATCA AGGCCGTGCC CGCCCATGGC CATACGCCGG GCCACAACAT CTACCTGGTC
GAGTCCAAGG GCCAGAAGCT GGTGCTGTGG GGCGACCTGA TGCACGTGGC CGCCGTGCAG
TTTGCGCAGC CGCAGATCAC CATCTCGTTC GACGTCGATT CGAAGCCGGC GGCGGCGGAA
CGCAAGAAGG CCTATGCCGA TGCGGCCAAG GGGCGCTACC TGGTCGGCAG TGCGCACCTG
CCGTTCCCGG GGCTGGGCCA TGTGCGGGCC GAAGGCAAGG GCTACGTCTG GGTGCCCGTG
GATTACCAGC AGGTGCGATA G
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| Protein sequence | MTTTTPARWL RRGVAALAGS LLMLSFSSTA QAGAPQVKTQ APGFYRTMLG DFEVTALFDG
TIDLEPKKLL TNTTQAQIGK LLDRGFEKDT VPTSVNAYLI NTGSKLVLVD TGAGGLFGPT
LGSLQANLKA AGYQPEQVDD VLITHMHGDH VGGLVQDGKL VFPNATIHAG QEDADFWLDK
ANLEKASAEM KGFFQGAMAS LNPYVEAGKF KGMKGNTDLV PGIKAVPAHG HTPGHNIYLV
ESKGQKLVLW GDLMHVAAVQ FAQPQITISF DVDSKPAAAE RKKAYADAAK GRYLVGSAHL
PFPGLGHVRA EGKGYVWVPV DYQQVR
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