Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3615 |
Symbol | |
ID | 7970690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3824854 |
End bp | 3826668 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794200 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_002945498 |
Protein GI | 239816588 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCCC CGACCGACAA AGACAGCGCA AAAACAGCCG CTGCACCGAG CAATTTCCTG CGCCACGTGA TCGAAAACGA CCTTGCGCAG GGGGCCTATT CTGGCCGCAA ATGGGGTGGC TCGCCCGGCG ACGCCGCCCA TCACGCCCAG GGCATGCCCG ACCCGGCCAA GGTGCGCATG CGCTTTCCGC CCGAGCCCAA CGGCTACCTG CACATCGGCC ACGCCAAGAG CATCTGGCTG AATTTCGAGC TGGCCAGGGA ATACGGCGGC GTCTGCCACC TGCGCTTCGA CGACACCAAC CCGGAGAAGG AAGAGCAGGA ATACGTCGAT TCCATCCGCG ACGCCGTCCA GTGGCTCGGC TACGAAACCC ACCTGGCCGA CCGCCCCACG GCCCCCGGCA CCCTGCAGCC GCACGAATAC TTCGCAAGCG ACTACTTCGA CTTCATGTAC CGGGCCGCCG AATACCTGAT CGGCGCCGGC CTGGCCTATG TGGACGAGCA AAGCGCCGAG GAAATCCGCG CCAACCGCGG CGACTTCAAC ACGCCCGGCA CCGACAGCCC GTTCCGCAGC CGCAGCGCGG AAGAAAACCT CGCCCGCTTC CGCGCCATGC GTGACGGCCA GCTGCCTGAC GGCGCCGCCA TCCTGCGCGC CAAGATCGAC ATGGCGAGCC CCAACATCAA CATGCGCGAC CCGGCGCTCT ACCGCATCCG CCGGGCCACA CACCACAACA CCGGCGACAA GTGGTGCATC TACCCGATGT ACACCTTTGC GCATCCCATC GAGGACGCGC TCGAGCAGAT CACCCATTCC ATCTGCACGC TGGAATTCGA AGACCAGCGC CCCTTCTACG ACTGGCTGCT CGACCGCCTG GCCGAAGGCG GCCTCATCGC AAGCCCGCAT CCGCGCCAGT ACGAATTCGC GCGCCTCAAC GTCACCCATG TGCTCACCAG CAAGCGCAAG CTGCGCCAAC TGGTCCAGGA AAAGCACGTC GACGGCTGGG ACGACCCGCG CATGCCCACC CTCGCGGGCC TGCGCCGCCG CGGCTACACG CCCGAGGCGC TGCGCCTGTT CTGCGAACGC AGCGGCACCA CCAAGTCCGG CGGCTGGATC GACTACGCGA GCCTGGAAGC CGCGCTGCGC GACACCCTCG ACCCCATCGC GCCGCGCGCC ATGGCCGTGC TCGACCCGGT CAAGCTGGTG ATCACCAACT GGGGCGAACT GATGGGCGGC GACGACGTGC TCGACGACTG CTCCGCCCCC GTGCATCCGC ACCACCCCGA AATGGGCAAA CGCGAATTCA AGCTCGGCCG CGAGGTCTGG ATCGAGCGCA CCGACTACGA GGAAGTGCAG CCCAAGGGGT TCTTTCGCCT GTTCCCGGGA AACAAGGTGC GCCTCAAGTA CGGCCACGTC ATCGAATGCA CCGGCGGCAC CAAGGACGCG AGCGGCAAGC TCGTCGAAGT GCAGGCCACG CTGGTGCCCG ACACCAAGAG CGGCACGCCG GGCGCGGACG CCATCAAGGT GAAAGGCAAC ATCACCTGGG TGGCTGCGGC CGATGCGGTC GAGGCCGAGG TGCGGCTGTA TGAGCGGCTG TTTGCGGCGG CCAATCCGGG CAGCGGCGAG CTGCTCGACG AGCTCAACAA GACGAGCCTG GAGGTTTGCT CCGCGTATGT CGAACCGTCG CTGGCCAAGG CGCAGGACGG TGCGGCATTC CAGTTCGAGC GGCACGGGTA CTTCGTGCTC GATGCGAAGG CGAGTGCCGG CGGCAAGCGC GTGTTCAATC GCGCTGCGGG CATGCGGGAC AGCTGGGGCA AGTAA
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Protein sequence | MTSPTDKDSA KTAAAPSNFL RHVIENDLAQ GAYSGRKWGG SPGDAAHHAQ GMPDPAKVRM RFPPEPNGYL HIGHAKSIWL NFELAREYGG VCHLRFDDTN PEKEEQEYVD SIRDAVQWLG YETHLADRPT APGTLQPHEY FASDYFDFMY RAAEYLIGAG LAYVDEQSAE EIRANRGDFN TPGTDSPFRS RSAEENLARF RAMRDGQLPD GAAILRAKID MASPNINMRD PALYRIRRAT HHNTGDKWCI YPMYTFAHPI EDALEQITHS ICTLEFEDQR PFYDWLLDRL AEGGLIASPH PRQYEFARLN VTHVLTSKRK LRQLVQEKHV DGWDDPRMPT LAGLRRRGYT PEALRLFCER SGTTKSGGWI DYASLEAALR DTLDPIAPRA MAVLDPVKLV ITNWGELMGG DDVLDDCSAP VHPHHPEMGK REFKLGREVW IERTDYEEVQ PKGFFRLFPG NKVRLKYGHV IECTGGTKDA SGKLVEVQAT LVPDTKSGTP GADAIKVKGN ITWVAAADAV EAEVRLYERL FAAANPGSGE LLDELNKTSL EVCSAYVEPS LAKAQDGAAF QFERHGYFVL DAKASAGGKR VFNRAAGMRD SWGK
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