Gene Vapar_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3614 
Symbol 
ID7970689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3824369 
End bp3824719 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content70% 
IMG OID644794199 
Producthypothetical protein 
Protein accessionYP_002945497 
Protein GI239816587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCA CACGTTCAAC CTTCTTCAAA TGGGCCGCCG CGAGTGTCGT GGCAGCCGGT 
GCATTGTTTG CGGCCACCTC GGCCAGTGCC CGTGGCGACG TGAGCTGGTC GGTCGGCGTG
GGCCTGCCAG GGGTTGCCGT GGGTGTGGGC GCTCCGGCCT ACTACCCGGC GCCGGTCTAT
ACGGCCCCCG CGCCGGTGTA TTACGACGCG CCGCCGCCCG TGTACTACCG TCCGCCGCCG
CCGGTCTACT ACCGTCCGGC CCCGGTGTAC TACGCGCCGC CGGCGTACTA CGGACCGCCG
CGCTACTACG GTCCGCGCGG CTACTACCAC GGCCATCGCC ACTGGCGCTG A
 
Protein sequence
MSLTRSTFFK WAAASVVAAG ALFAATSASA RGDVSWSVGV GLPGVAVGVG APAYYPAPVY 
TAPAPVYYDA PPPVYYRPPP PVYYRPAPVY YAPPAYYGPP RYYGPRGYYH GHRHWR