| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3575 |
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| Symbol | |
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| ID | 7970650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3773562 |
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| End bp | 3774566 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794160 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945458 |
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| Protein GI | 239816548 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.571272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCA CGCCTCTTTC CTTGAGCTTC GACCGCCGCC GCGCACTTGC CGCGCTGGGC
GGACTCGCCC TGGCGCCGCT CGCGCTCGAC GCGCAAGCCC AGGCCTTCAG GCCCGGCCAG
CCGATCAAGG TGCTGATCGG CGTGCCCGCC GGCGGCACGC AGGACGTGCT GACGCGTGCC
ATCGCGCAGC AGGTGCGCGA TGCGCTGGGC CCGCTCATCA TCGACAACCG CGCGGGTGCG
GCGGGCCGCA TCGCGGCCGA AACCGTCAAG ACGGCCGCGC CCGACGGCCA CACGCTGCTG
CTGGGAACGG CCAGCATGAT GACCATGTTC CCGAGCGCAT ACCGCAGCCT CTCGTACGAC
CCCATCAAGG ATTTCGTGCC CATCATCAAC GCGGCGCGCT TCGAGCTGGC GCTCACCGTG
CACAAGGACG TGCCCGCCAA CACGCTGTCC GAATTCATCG CCTGGGCCAA GGCGCAGGGC
GACAAGCTGA GCTTCGGCTC CTATGGCGCG GGCACGCCTT CGCACTTCCT TGGCGAGATG
CTCAACCGCG CGGCCGGGCT CAAGATGGTG CACGTGCCCT ACCGCGGCTC CACGCCCGCG
CGGCAGGACC TGATGGGCGG CACCGTGCCG GTGTACTTCG ACACCGTCGG CGGCGCGCAG
CAGATGCTGC CCACGGGCCG CGCGAAGGTG CTGGCCACCA GCGGCGAGAA GCGCTCGCCG
CTCATGCCCA ACCTGCCTTG CTTCGTCGAG GCCGGCTACA AGGACGTGGT GGCCACCGCC
TGGTTCGCCT ACTATGCGCC GCTCAAGACG CCGCAGCCCG TCATCGACAA GCTGCGCGCC
GAATTCACCC GCGCCGTCAA TGCCCGCGAG GTGCGCCAGC TGCTGCTGCA AAACGGCATG
TACCCGATCG CCGACGGCAG CGAGGCCTTG CTCAAGACCA TGCGCGAGGA CACCGCGCGC
TGGGCGGGCA TCATGAAGGC CGTGAATTTC CAGGCCACCG ACTGA
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| Protein sequence | MPSTPLSLSF DRRRALAALG GLALAPLALD AQAQAFRPGQ PIKVLIGVPA GGTQDVLTRA
IAQQVRDALG PLIIDNRAGA AGRIAAETVK TAAPDGHTLL LGTASMMTMF PSAYRSLSYD
PIKDFVPIIN AARFELALTV HKDVPANTLS EFIAWAKAQG DKLSFGSYGA GTPSHFLGEM
LNRAAGLKMV HVPYRGSTPA RQDLMGGTVP VYFDTVGGAQ QMLPTGRAKV LATSGEKRSP
LMPNLPCFVE AGYKDVVATA WFAYYAPLKT PQPVIDKLRA EFTRAVNARE VRQLLLQNGM
YPIADGSEAL LKTMREDTAR WAGIMKAVNF QATD
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