Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3546 |
Symbol | |
ID | 7972172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3740426 |
End bp | 3740701 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794131 |
Product | hypothetical protein |
Protein accession | YP_002945429 |
Protein GI | 239816519 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0703945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCTCT ACCTGATCGA GCGCAATTTT GCGGATCAAC TCGAGGTCTC GCCCGAGGCC GCGGCCGGCA TCATCCGCGT CAACGACGAC GTCGGCGTGC GCTGGCTGTA TTCGTTCCTC AGCGCCGACA AGAAGAAGAC CTACTGCCTG TACGAAGCCC CCGGCATCGA GCCGATCCGC GAGGCGGCAC GGCGCAACGG ACTGCCGGCC GATGTGGTGG TCGAGGTCGG CGAGCTGCGC CCGCCGCCGC TGCCGGCCGA CCTCCTGTCG GCCTGA
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Protein sequence | MPLYLIERNF ADQLEVSPEA AAGIIRVNDD VGVRWLYSFL SADKKKTYCL YEAPGIEPIR EAARRNGLPA DVVVEVGELR PPPLPADLLS A
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