Gene Vapar_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3546 
Symbol 
ID7972172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3740426 
End bp3740701 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content68% 
IMG OID644794131 
Producthypothetical protein 
Protein accessionYP_002945429 
Protein GI239816519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0703945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTCT ACCTGATCGA GCGCAATTTT GCGGATCAAC TCGAGGTCTC GCCCGAGGCC 
GCGGCCGGCA TCATCCGCGT CAACGACGAC GTCGGCGTGC GCTGGCTGTA TTCGTTCCTC
AGCGCCGACA AGAAGAAGAC CTACTGCCTG TACGAAGCCC CCGGCATCGA GCCGATCCGC
GAGGCGGCAC GGCGCAACGG ACTGCCGGCC GATGTGGTGG TCGAGGTCGG CGAGCTGCGC
CCGCCGCCGC TGCCGGCCGA CCTCCTGTCG GCCTGA
 
Protein sequence
MPLYLIERNF ADQLEVSPEA AAGIIRVNDD VGVRWLYSFL SADKKKTYCL YEAPGIEPIR 
EAARRNGLPA DVVVEVGELR PPPLPADLLS A