| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3522 |
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| Symbol | |
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| ID | 7972148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3713406 |
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| End bp | 3714650 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794107 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_002945405 |
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| Protein GI | 239816495 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC CGCTGAAAAC CCGCCTCAGC CGCCGCCGCG TACTGCAAGC CGCCGCCATC
GGCGCCGTGG GAGTCAATCC CGCGCTGCGC GCCGCCGTCT GGGCCCAGGG CTCCGACAAG
CCCGAGAAGG AAGAAGTGAA GATCGGCTTC ATCCCGCTGA CCGACTGCGC CAGCGTGGTG
ATGGCCTCGG TGCTGGGCAT CGACAAGAAG TACGGCGTGA AGATCGTGCC CAGCAAGGAA
GCCAGCTGGG CCGGCGTGCG CGACAAGCTC TCCAACGGCG ACCTGGACAT GGCGCACGTG
CTCTACGGAC TGGTCTACGG CATGCACCTG GGCCTGAGCG GCCCCAAGAA GGACATGGCC
GTGCTCATGA CCCTCAACAA CAACGGCCAG GCGATCACGC TGTCGAAGAA GCTCGCGGAC
AAGGGCGCGG TGGATGCGGC CTCGCTCGCC AAGCTGATCG CGAGCGAAAA GCGCGAATAC
ACCTTCGCAC AGACCTTTCC CACGGGCACG CATGCGATGT GGCTCTACTA CTGGCTTGCA
TCGGCCGGCA TCGACCCGTT CAAGGACGTC AAGAACATCA CGGTGCCGCC TCCGCAGATG
GTGGCCAACA TGCGCGTGGG CAACATGGAC GGCTACTGCG TGGGCGAGCC CTGGGGCCAG
CGCGCGATCA TGGACGGCAT CGGCGTGACG GCCATCACGA CGCAGGACAT CTGGAAGGAC
CACCCCGAGA AGGTGCTGGG CACCACGGGC GACTTCGTCA AGAAGTATCC CAACACCGCG
CGCGCCGTCA CCGCGGCCAT CATCGAGGCC GGCAAGTGGA TCGACACCGG CCTGCAGAAC
AAGAACAAGA TGGCCGAGAC CATCGCCGAC AAGAGCTACG TCAACACCAG CGTGGATGCG
ATCAACCAGC GCATCCTCGG GCGCTACGTC AACGGCATGG GCAAGAGCTG GGACGACCCC
AACCACATGA AGTTCTACAA CGGCGGCGCC GTGAGCTTTC CCTACCTGTC GGACGGCATG
TGGTTCCTCA CGCAGCACAA GCGCTGGGGC CTGCTCAAGG AGCATCCGGA CTACCTGAAG
GTGGCCACCG AGATCAACCG CATCGACATC TACAAGCAGG CCGCCGCCGC CACGCAGACC
CCGGTGCCCA AGGACACGAT GCGCAGCAGC AAGCTGTTCG ACGGCACCGT GTGGGACGGC
AAGGATCCGA AGAAGTACGC CGAGTCTTTC AAGCTGCATG CCTGA
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| Protein sequence | MTDPLKTRLS RRRVLQAAAI GAVGVNPALR AAVWAQGSDK PEKEEVKIGF IPLTDCASVV
MASVLGIDKK YGVKIVPSKE ASWAGVRDKL SNGDLDMAHV LYGLVYGMHL GLSGPKKDMA
VLMTLNNNGQ AITLSKKLAD KGAVDAASLA KLIASEKREY TFAQTFPTGT HAMWLYYWLA
SAGIDPFKDV KNITVPPPQM VANMRVGNMD GYCVGEPWGQ RAIMDGIGVT AITTQDIWKD
HPEKVLGTTG DFVKKYPNTA RAVTAAIIEA GKWIDTGLQN KNKMAETIAD KSYVNTSVDA
INQRILGRYV NGMGKSWDDP NHMKFYNGGA VSFPYLSDGM WFLTQHKRWG LLKEHPDYLK
VATEINRIDI YKQAAAATQT PVPKDTMRSS KLFDGTVWDG KDPKKYAESF KLHA
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