| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3453 |
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| Symbol | |
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| ID | 7972564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3637975 |
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| End bp | 3638787 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794037 |
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| Product | protein of unknown function DUF455 |
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| Protein accession | YP_002945336 |
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| Protein GI | 239816426 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2833] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCCCC GATTGAGCGC GCTGGCCGCG CTGCGACTCA CCGACCCTGA ACAGAAAGTT
GCGGCAACAC GCGCCACTGC TGCCCTGGCC GCTACCAATT CCATAGCGAC CGACCCTCTG
CGCGTCGTGG GCGATGACGT CGGCGTGCCG GGCCGCCCCG AACGGCCGCT GCGCGTGGCC
GCCACCGCCG TGCAGAAGCG CTCGCCCTTC ACGCCCGAGG GCCGCGCCGC GCTGATCCAT
TCGATCTGCC ACATCGAGTT CAACGCCATC AACCTCGCGC TCGACGCCGT CTGGCGCTAC
GACGGCATGC CCGAGGCCTA CTACCGCGAC TGGCTGCGCG TGGCCGACGA AGAGGCGCAG
CACTTCACGC TGCTGCATGC GCACCTGCAG GACATGGGCT GGCGCTACGG CGACTTCCCC
GGGCACGACG GACTCTGGAG CATGTGCGAG AAGACCAGGG ACGACGTGCT CGCGCGCATG
GCGCTGGTGC CTCGCACGCT CGAAGCGCGC GGGCTCGACG CCACGCCGCT GATCCAGGCC
AAGCTCAAGC GCGTGAACAC GCCCGATGCG CTGCGCGCGG TCGAGATCCT CGACATCATC
CTGCGCGACG AAGTGGGCCA CGTGGCCATC GGCAACCACT GGTACCGCTG GCTCTGCGAA
CGCGCCGGCC GCGACCCGGA GGCGACCTAT CCGGAACTCG TGGCGCGCTA CGAAGCGCCG
CGCCTGAAGC CGCCCTTCAA CCTCGAAGCC CGTGGCCGCG CGGGCTTCAG CGCCGAGGAG
CTGCGCGCGC TCTCGGCCGG CAGCAAGGAC TGA
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| Protein sequence | MHPRLSALAA LRLTDPEQKV AATRATAALA ATNSIATDPL RVVGDDVGVP GRPERPLRVA
ATAVQKRSPF TPEGRAALIH SICHIEFNAI NLALDAVWRY DGMPEAYYRD WLRVADEEAQ
HFTLLHAHLQ DMGWRYGDFP GHDGLWSMCE KTRDDVLARM ALVPRTLEAR GLDATPLIQA
KLKRVNTPDA LRAVEILDII LRDEVGHVAI GNHWYRWLCE RAGRDPEATY PELVARYEAP
RLKPPFNLEA RGRAGFSAEE LRALSAGSKD
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