| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3401 |
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| Symbol | |
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| ID | 7970639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3581781 |
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| End bp | 3583625 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793985 |
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| Product | sulfatase |
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| Protein accession | YP_002945284 |
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| Protein GI | 239816374 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCG ATGCCGGGCG AGCCCGTCTG GGCCTGCGAG GCGCAATAAG TTCCGTGGGG
GATATCCCGC AGCGCCGCAG CAAAGACCCC GTTGCAGCCC GGACACTGGC AGGCAGCGCA
CACGCCGCGG GGCAAAATGC GCCCGCCCTC TCGACCTCCC GCTTTGCACG ATTGACCACC
CTCCACTCCG AAGCGTCCGC TGTCCGGAAC GCCTCGCACC CACTGCTCGC CTGCGGCGCG
GTCGGTGCCA CGCTGCTGGC ATTCATCGTG CTGGGCCATG ACGGCCGGCG GATCGCGCAG
CTCGCGGTGC TCGCCGCGCC GATGGTGCTG TGGCTCGCGT GGCCGCTGCG CAGCGCACGA
CTGCGGCGCC TGCGCGCGGC GCTCGTCTGG CTCTGGGTGA TGGGCTTCGC GCTCGACGGC
GTGGCGCGCG CCTACCTGCT CGACACCTAC CAGGCCGCGC CCGACGGCGC GATGGTGCTG
GGCGCCGCGG CCAACACCAG CGTGCGCGAA AGCACCGAAT ACCTGAGGAT GCACTGGCGG
TCCGCCGTCG TCTGGTCGGC GGCGCTGGCG GGGGCCGCGG TGCTCGCGGG CATGTTCGTT
CGGCGCGGTG CGGCGGCGGT TTCAGCTTCG TTGGCGCCGG GCATGCGCCC GCGCCTACCG
TTCTGGCTGA GATCGCTGGT GCTCGCGCTG CTGCTGCTCG CCTGCCTGGC CTATGCGAGC
AAGCCGTGGC GCCGGCTGCA TCCCGCGCTG TTCTGGTCCC AGTGGTCGCA TTCGGTCCAC
ACGCTGCGCG CCGCATGGGC CGACCAGCAG CAGGTGCGCG ACCGCATGAT GGCGCAGGCC
AAGGCGATCG CGCCCGTGCC GCTGGAGGCC GGCCCGTCGA CGGTGGTGCT GGTCATCACC
GACAGCATCA ACCGCGACAA CATGGCGCTC TACGGCTACG GTCGCCCGAC CACGCCGCGT
CTGCTGGCGC ACAAGGCACA GGCCGGCGAC CAGATGGCCG TGCTGCGCCA CGCGTGGTCG
GCGGATGCGA GCACCCTGCC CGCGCTGCGC AACCTGTTCC ACTTCGGCTT GCCCCACACG
GAGAACGGCG AGAACCCGCC GCACCTGCTG GCGCTGGCAC GCGCCGCGGG CTACAAGGTC
TGGTGGATCA GCAACCATGA CGACCTGGCC ATCGAGCAGC AGCATGCGCG CTTCGCCGAT
GTGGTGGACA TGGTGAACCG CACGCCCGGC CGCGCCAGCG CCTCGCTAGA CGGCGAGATC
CTCGACTGCG TGCAGGAGGC GCTGCAGGAT GCGGGCACCG ACCGCAAGCT GATCGTGGTG
CACCTCATGG GCGCGCACCC GCACTACAGC CTGCGCTTTC CCGAGAACGC CAATCCCTTC
GACGACGACG TGGACGCGGT CGAGACCGGC CTGGTGAAGA ACGGCCGGTC GGCCTGGGTG
CGCCGCTTCC GGCAGGAGTA CGACGCCGCG CTGCTGTACC ACGACTTCGT GGTGTCCGAG
CTTTTGCAGC AGACGCGCAG CGCGGGCAAC CCGCATGACT ATCGCGCCTG GATCTACCTG
TCGGACCACG GCCAGGAAGT GGGGCATGGC AGCGACCGTG CGGGCCACAG CCCTTCGACC
GCTTCGGGCT ACCGCATTCC GGCGGTGATC TGGCGCAACC GGCAGCCGCT GCCGGACGGC
GCCGCGCAGC AGCAGCCCTT TCGCGCCGAC TGGGCGGCCT GGACGCTGAT GGACCTGCTC
AAGATCCAGT GGCGCGGCCA GGTGCCCGAG CGCAACGTGC TGGACCCGGC CTACCGCTGG
CAGGCCCCGA AGATCCCGGT GGCCGTCGAA TCGTTCTCGC GCTGA
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| Protein sequence | MSGDAGRARL GLRGAISSVG DIPQRRSKDP VAARTLAGSA HAAGQNAPAL STSRFARLTT
LHSEASAVRN ASHPLLACGA VGATLLAFIV LGHDGRRIAQ LAVLAAPMVL WLAWPLRSAR
LRRLRAALVW LWVMGFALDG VARAYLLDTY QAAPDGAMVL GAAANTSVRE STEYLRMHWR
SAVVWSAALA GAAVLAGMFV RRGAAAVSAS LAPGMRPRLP FWLRSLVLAL LLLACLAYAS
KPWRRLHPAL FWSQWSHSVH TLRAAWADQQ QVRDRMMAQA KAIAPVPLEA GPSTVVLVIT
DSINRDNMAL YGYGRPTTPR LLAHKAQAGD QMAVLRHAWS ADASTLPALR NLFHFGLPHT
ENGENPPHLL ALARAAGYKV WWISNHDDLA IEQQHARFAD VVDMVNRTPG RASASLDGEI
LDCVQEALQD AGTDRKLIVV HLMGAHPHYS LRFPENANPF DDDVDAVETG LVKNGRSAWV
RRFRQEYDAA LLYHDFVVSE LLQQTRSAGN PHDYRAWIYL SDHGQEVGHG SDRAGHSPST
ASGYRIPAVI WRNRQPLPDG AAQQQPFRAD WAAWTLMDLL KIQWRGQVPE RNVLDPAYRW
QAPKIPVAVE SFSR
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