Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3392 |
Symbol | |
ID | 7970630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3572331 |
End bp | 3572639 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793976 |
Product | putative integral membrane protein |
Protein accession | YP_002945275 |
Protein GI | 239816365 |
COG category | [S] Function unknown |
COG ID | [COG5477] Predicted small integral membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.294707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATT GGATGGTCTG GACCACCCCG GTGGCCGTTT TCTTCATCTG CATCGCGCTC ATGCTGGTCG GCATGACGGT GTGGGAGTTC AAGTCGCCCA CCACCATGCG GCGCGGCTGG CTGCCGATTG CCACCACGCG CGGCGACCGG CTCTTCATCG GGCTGCTGGC CGCGGCCTAT GTGAACCTGG TCTTCATCGG CCTGGCCGGC AAGTTCCAGG AATGGATGAG CCTGGAAGCC GAGCCCTCGA TCTGGATCAG CTTCGTGCTG TCGATGGGGC TGCTCGCGCT GGTGATGCGC AAGGGCTGA
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Protein sequence | MFDWMVWTTP VAVFFICIAL MLVGMTVWEF KSPTTMRRGW LPIATTRGDR LFIGLLAAAY VNLVFIGLAG KFQEWMSLEA EPSIWISFVL SMGLLALVMR KG
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