| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3378 |
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| Symbol | |
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| ID | 7970616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3557730 |
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| End bp | 3558701 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793962 |
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| Product | protein of unknown function DUF58 |
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| Protein accession | YP_002945261 |
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| Protein GI | 239816351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.476103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGT CGCTACGCTC GCGCATCGAC GGCTGGTTCC TGTCGCGCCG GCCGCCTTCG
GACACGCTCG AGCTCACGCA GCGCAACGTC TACATCGTGC CCACGCGCGC CGGCTGGACG
CTGGGCGCCA CGCTGCTGGT GCTGCTGATC GCGTCGATCA ACTACCAGCT CAACCTCGGC
TACCTGCTGA CCTTCCTGCT CGCGGGCAGC GTGGCCGTGG GCATGCACGT GAGCCACGCC
ACGCTGCGCG GCCTGGCCAT GCACATGATG GCGCCGGAGG CGCACTATGC GGGCGCCGCC
GCGGTCTTTC GCGTGGTGCT GCACAACACG CGGCGCAGCG TGCGCTACGG CATCGGCATG
GCCGTTCGCG GCAGCGGCCA GTGGGCCTGG ACCGACGTCC CGGCCGAGGG CAGCGCCACC
GTCGAGATCG CCTTCAAGCC CGAGCGGCGT GGGCTCCATC CAGTGCCCAC GCTCACCGCC
GAAACGCGCT TTCCGCTTGG CACCTTCCGC GTCTGGACGG TGTGGCGCCC GGCCGCGAAG
ATGCTGGTCT ATCCCGCGCC CGAGGCGCAT CCGCCGCCGC TGCCGCCGGG CGAGCCGCTG
TCGGGCCCGG CCGCCACCTC GGCCGCGCTG CGCGCGCAGG CCGCCGGCGA ATACGACGGC
CTCCGTGCCT ACCGGCGCGG CGATCCACTC AAGCTCGTGG TCTGGAAGAA GGCGGCCCGC
GCGCAAGCCA CCGGCTCGGA AGACCTGGTG AGCCGCGACA CGCAGCAGAC GCAGCGCGAA
GAACTGTGGC TCGACGCCCA GGCCACCCAG CTGGCCGACA CCGAAGCCCG GGTGTCGCGG
CTGTGCGCCT GGGTGCTGAT GGCGGACCGC GTGGGCGTGG ACTACGGCAT CCGCGTGGCC
GCGCGCGTGG TGCAGCCCTC GCAGGGCGAA GCCCACCGAA GAGCCTGCCT GGAGGCGCTG
GCGCTATGTT GA
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| Protein sequence | MIASLRSRID GWFLSRRPPS DTLELTQRNV YIVPTRAGWT LGATLLVLLI ASINYQLNLG
YLLTFLLAGS VAVGMHVSHA TLRGLAMHMM APEAHYAGAA AVFRVVLHNT RRSVRYGIGM
AVRGSGQWAW TDVPAEGSAT VEIAFKPERR GLHPVPTLTA ETRFPLGTFR VWTVWRPAAK
MLVYPAPEAH PPPLPPGEPL SGPAATSAAL RAQAAGEYDG LRAYRRGDPL KLVVWKKAAR
AQATGSEDLV SRDTQQTQRE ELWLDAQATQ LADTEARVSR LCAWVLMADR VGVDYGIRVA
ARVVQPSQGE AHRRACLEAL ALC
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