| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3340 |
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| Symbol | |
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| ID | 7970578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3518718 |
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| End bp | 3519788 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793925 |
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| Product | Alcohol dehydrogenase GroES domain protein |
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| Protein accession | YP_002945224 |
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| Protein GI | 239816314 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATGC GTTGTATGTG CCTCGTGATC CATGCCCCCG ACGACCTGCG GCTGGAGGAA
CAGGACGCGG GCGAGATCGG CCCGGGCCAG GTGCTGGTGA AGGTCGGCAT GGGCGGCATC
TGCGGCTCCG ACCTGCACTA CTTCCACAAC GGCGGCTTCG GCACGGTGCG CATCAAGGAG
CCGATGGTGC TGGGCCACGA GGTGGCCGGC ACCGTGGTGG CCACGGCGCC CGGCGTCGAC
AGCGTGCGCA TCGGCGACAA GGTCGCCATC AATCCGAGCC GCCCCTGCGG CGCCTGCAAG
TTCTGTCTCG AAGGCCTGCC CAACCAGTGC CTGGAGATGC GCTTCTACGG CAGCGCCATG
CGCATGCCGC ACGTGCAGGG CGCATTCCGC AACATGCTGC TGTGCGAGGC CACGCAATGC
GTGAAGGTGG CGGACCACGT GCCGCTGCGC CTCGCGGCGC TGGCCGAGCC GTTCTCGGTC
GGGCTGCATG GCGTCTCGCG CGCAGGGCCG CTGCTGGGAA AGCGCGTGCT GGTGTCGGGC
TGCGGGCCCA TCGGCGTGCT GGCCATTGCG GCGGCGCGCG TGCACGGCGC GGCCGAGATC
GTGGCGACCG ACGTGGTCGA CGAACCGCTC GCGATTGCAC GCGCCATCGG CGCCGACCAC
GCCATCAACG TCGCGCAGGA CAAGGCCTGG GTGTCGCGCT ATTCGGCCGA CAAGGGCACG
TTCGACGTGA TGCTCGAATG CTCGGGCAAC GAACGCGCGC TGCGCGACGG GCTCGAGGTG
ATGCGCCCGC GCGGCGTGGT GGTGCAGCTG GGCCTGGGCG GCGACGTGAG CATTCCGCAG
AACATGGTGG TGGCCAAGGA GCTCAGCATT TGCGGCTCGT TCCGCTTCCA TGCGGAATTC
GCGCTGGCGG TGCGGCTCAT CAACGAAGGG CGGGTCGACC TGTCGCCGGT GGTGTCGCAC
ACCTTTCCGA TGCTGCAGGC GCGCGAGGCT TTCGAGCTGG CGAGCGACCG GAAGCAGGCG
ATGAAGGTGC TGATCGATTT TGCGGACGCC GGGGAAGCCG CAACCGCCTG A
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| Protein sequence | MRMRCMCLVI HAPDDLRLEE QDAGEIGPGQ VLVKVGMGGI CGSDLHYFHN GGFGTVRIKE
PMVLGHEVAG TVVATAPGVD SVRIGDKVAI NPSRPCGACK FCLEGLPNQC LEMRFYGSAM
RMPHVQGAFR NMLLCEATQC VKVADHVPLR LAALAEPFSV GLHGVSRAGP LLGKRVLVSG
CGPIGVLAIA AARVHGAAEI VATDVVDEPL AIARAIGADH AINVAQDKAW VSRYSADKGT
FDVMLECSGN ERALRDGLEV MRPRGVVVQL GLGGDVSIPQ NMVVAKELSI CGSFRFHAEF
ALAVRLINEG RVDLSPVVSH TFPMLQAREA FELASDRKQA MKVLIDFADA GEAATA
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