| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3318 |
|---|
| Symbol | |
|---|
| ID | 7973714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 3497025 |
|---|
| End bp | 3497708 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644793903 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_002945202 |
|---|
| Protein GI | 239816292 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCA TGACCTCCCA TCTCAAGATC GATTTCGTTT CCGATGTCTC CTGCCCCTGG
TGCGCCGTCG GCCTGGGTTC GCTCGAGGCG GCGCTGCGGC GCGTCGCGCC CGGCATCACG
GCGGAGCTGC ACTTCCAGCC TTTCGAGCTG AACCCGCAGA TGCCGCCCGA AGGCCAGGAC
ACCTTCGAGC ACCTGAGCCA GAAATACGGC TCCACGCGTG AACAGCAGGC AGAGTCGCGC
GAGATGATCC GCCAGCGCGG GGCCGAGGTG GGCTTCGAGT TCAGCCCCGA GGGCCGGCCG
CGCATCTACA ACACCTTCGA CGCCCACCGC CTGCTGCACT GGGCCGAGCT CGAAAGCCCG
GCCAGGCAGG CGGCACTCAA GAAGCTGCTC TTGAAGGCCT ACTTCACCGA CCGCCAGAAC
CCCTCCGACC ACGAGGTGCT GGTGCGCCTG GCCGCCGAGG CCGGGCTCGA TGCGGCACGG
GCCCGCGAGA TTCTGGCTAG CGACGAATTC GCCCGCGAAA CCCGCGAGCG CGAACGCATG
TACACCGACG CCGGCATCCA TTCGGTGCCC GCGATCATCA TCAACGACCA GCACCTGATC
TCGGGCGGCC AGCCGGTCGA GGTGTTCGAG CGCGCCTTGC GCCAGATTGC CGGCGCTGCA
CCTGCCAGCG TGGCGGTTGC CTGA
|
|---|
| Protein sequence | MAGMTSHLKI DFVSDVSCPW CAVGLGSLEA ALRRVAPGIT AELHFQPFEL NPQMPPEGQD
TFEHLSQKYG STREQQAESR EMIRQRGAEV GFEFSPEGRP RIYNTFDAHR LLHWAELESP
ARQAALKKLL LKAYFTDRQN PSDHEVLVRL AAEAGLDAAR AREILASDEF ARETRERERM
YTDAGIHSVP AIIINDQHLI SGGQPVEVFE RALRQIAGAA PASVAVA
|
|---|
| |