Gene Vapar_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3298 
Symbol 
ID7973694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3475752 
End bp3476360 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID644793883 
Producthypothetical protein 
Protein accessionYP_002945182 
Protein GI239816272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.678819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGT CACCGCTTGC AACGATGCTT CAGCCCTCGA TCCCCAAAAG CTGTGGCGCC 
ATGTTTCCCA CCAAGACCGA CAAGGCACGC GACGAACTCC AGGGCCGCCA GCGCACGCTG 
AGCCAGCGCG AGCGCGCCTT GCTGCTGATG GCAGACGGCC GGCGTTCGCT GACCGATTTC 
AGCCCGCTGT TCGCCAGCCG CACCGAAGCC GAGCAGGCGA TCCAGGCGCT GATGCGCCAG 
GGCTATCTGC AGGACGCGCA GCCGGTGGCT GCCGCGGCGG CGCAGGCCGC GGCCCAGCCG 
CCCGCCCCGG TACCCGCGGC CGACCCGATC CAACTCGCCA CCGCCGCCGA CAACTTCGAC 
GGCAAGCGCT CCCTGGCCAC CACGCGCATG TTCCTGTTCG ACATCTGCGA GCGCATGTTC 
GTGCGGCGCG ACCCCAAGTT CGCGCTGCAG ATGCGCGATG CCCTGCGCGA GGCGCGCGAC 
CGCGGCGCGA TGCTGACCAT CGCCGCGCTG ATGCTCACCG AGGTCGAGAA AACCGCCGGC 
GCCGAGCGGG CCGAATCGCT GCGCGAGCGC ATCGACCGGC TGCTGCCGCC GGCCGAGACC 
GTGCACTGA
 
Protein sequence
MKMSPLATML QPSIPKSCGA MFPTKTDKAR DELQGRQRTL SQRERALLLM ADGRRSLTDF 
SPLFASRTEA EQAIQALMRQ GYLQDAQPVA AAAAQAAAQP PAPVPAADPI QLATAADNFD 
GKRSLATTRM FLFDICERMF VRRDPKFALQ MRDALREARD RGAMLTIAAL MLTEVEKTAG 
AERAESLRER IDRLLPPAET VH