| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3261 |
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| Symbol | |
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| ID | 7973657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3436090 |
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| End bp | 3436728 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793846 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_002945145 |
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| Protein GI | 239816235 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.812552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTGGA CCCAAGACCA AATGGCCGCG CGTGCGGCGC AAGAACTCGA AGACGGCTTC
TACGTGAACC TGGGCATCGG CATTCCCACG CTGGTGGCCA ACTTCGTCGG CGACAAGGAA
GTGTGGCTGC AAAGCGAGAA CGGCATGCTC GGCATCGGCC CGTTCCCCAC CGAAGACCAG
GTCGACGCCG ACCTGATCAA CGCCGGCAAG CAGACCGTGA CCACCATCCC CGGCTCGGCC
ATCTTCGGCA GCCATGACAG CTTCGCGATG ATCCGCGGCG GCAAGATCAA CCTGTCGATC
CTCGGCGCCA TGCAGGTCAG CGTGAAGGGC GACCTCGCCA ACTGGATGAT CCCCGGCAAG
ATGGTCAAGG GCATGGGCGG CGCCATGGAC CTGGTGGCCG GCGTGAAGCG CGTGATCGTG
CTGATGGAGC ACGTCGCGAA GAAGAAGGAC GGCACCGAGG ACCTCAAGAT CCTCGAGAAG
TGCACGCTGC CGCTGACCGG CGTGGGCGTG GTCGACCGCA TCATCACCGA CCTGGCCGTG
ATGGACGTGG TGCCCGAAGG CCTCAAGGTG GTCGAGCTCG CGCCGGGCGT GAGCTTCGAC
GCGCTGCAGG CCAAGACCGG CGCCAAGCTG ATCCAGTAA
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| Protein sequence | MPWTQDQMAA RAAQELEDGF YVNLGIGIPT LVANFVGDKE VWLQSENGML GIGPFPTEDQ
VDADLINAGK QTVTTIPGSA IFGSHDSFAM IRGGKINLSI LGAMQVSVKG DLANWMIPGK
MVKGMGGAMD LVAGVKRVIV LMEHVAKKKD GTEDLKILEK CTLPLTGVGV VDRIITDLAV
MDVVPEGLKV VELAPGVSFD ALQAKTGAKL IQ
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