| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3236 |
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| Symbol | |
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| ID | 7973469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3413209 |
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| End bp | 3414171 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793821 |
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| Product | heat shock protein DnaJ domain protein |
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| Protein accession | YP_002945120 |
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| Protein GI | 239816210 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCA AGGACTACTA CAGCGCCCTG GGCATCGACC GCACCGCGTC CGAGGACGAC
GTGCGCAAGG CCTACCGCAA GCTCGCGCGT AAGTACCACC CCGACGTCAG CAAGGAGCCC
GACGCCGAGA AGCGCATGCG CGACATCAAC GAAGCCAACG ACGTGCTGCG CGACAAGGAA
AAGCGCGCCG CCTACGACGC GCTGGCCGAC CGCGTGGCGC GCGGCGGCCA CGCGCAGGGC
GACTTCCAGC CGCCGCCGGA CTGGGACACG GGCTTCGAGT TCCACCGCGG CCCCAACCAG
GGCCCGGCCG ACCATGCCGA CTTCAGCGAG TTCTTTTCGT CGCTGTTCGG CGAGGCCGAG
CGCCGCGGCG CCGCAAGGCG CAACTACCGC GCGCGCGGCG AAGACCACCA CGCGGCGATC
GAGATCGCGC TCGAGGACGC GCTCAACGGC GCCGAGCGCG AGATCACGCT GCGCGCACAG
GAGCTCGATG CAGAGGGCCG GCCCGTCTTC AAGACGCGCA CGCTCAGCGT CAAGATCCCG
CCGGGCGTGC ATCCGGGCCA GTTCATCCGG CTCGCCGGCC AGGGCATGCC GGGCCATGGC
GGCGAACCCG CGGGCGACCT GTACCTGGAG GTGCGCATCG CGCCGCACCG GCTCTACCGC
GTCGAGGAAC GCGACCTCTA CATGACGCTG CCCGTCACGC CGACCGAGGC CGCGCTCGGT
GCGCAGGTCC AGGTGCCCGT GCCTACCGGC GGCGTGGTCG AGGTGACCGT GCCGCGCAAC
GCGCGCAGCG GCCTCAAGCT GCGGCTCAAG GGCCGCGGGC TGGCCGGCAA GCAGCCTGGC
GACCTGTACC TGCTGCTCGA CATCGCCCTG CCCCCGGCCG ACAGCGAGGC CGCGCGCAAG
GCCTACGAGC AGCTGGCGCA GGCATCCGCT TCGTTCAACC CACGCCAGCA TCTGGGAGTG
TGA
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| Protein sequence | MEFKDYYSAL GIDRTASEDD VRKAYRKLAR KYHPDVSKEP DAEKRMRDIN EANDVLRDKE
KRAAYDALAD RVARGGHAQG DFQPPPDWDT GFEFHRGPNQ GPADHADFSE FFSSLFGEAE
RRGAARRNYR ARGEDHHAAI EIALEDALNG AEREITLRAQ ELDAEGRPVF KTRTLSVKIP
PGVHPGQFIR LAGQGMPGHG GEPAGDLYLE VRIAPHRLYR VEERDLYMTL PVTPTEAALG
AQVQVPVPTG GVVEVTVPRN ARSGLKLRLK GRGLAGKQPG DLYLLLDIAL PPADSEAARK
AYEQLAQASA SFNPRQHLGV
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