Gene Vapar_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3235 
Symbol 
ID7973468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3412522 
End bp3413163 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content74% 
IMG OID644793820 
ProductPhosphoglycerate mutase 
Protein accessionYP_002945119 
Protein GI239816209 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGG CACCCTTCCC CCACGGCGCG GCCCCCGGCC TCGACCAGCT GGTGCGCATT 
GCCGCCGGGC AGCCGCTGTC ACCGGCCTGC GACCATTTCT ACTTCCTGCG CCACGGCCAG 
ACCGGCCGCA ATGCGCAGCG CATCTTCCAG GCCGTGGACG AGCCGCTGAG CGAGCTCGGC 
CTGCAGCAGG CTGCACGCGC CGCCCAGCTG CTGGCTGGCG AGCCGATCCG CACCATCGTC 
TGCAGCGACG CCCGCCGCGC GCACGACACC GCGCATGCCG TGGCCACCGT GCTGCGCCTC 
GAGCCCACGC CGCAGGCGGG CCTGCGCGAG CGCAACTTCG GCGCGCTCAT CGGCACCTCG 
TCGGCCGAGA TCGACTGGGC CTGCGAGCCC GAGGGCGGCG AAACCCTGGC CCAGTTCGTG 
GCCCGCAAGC GGCTCGCGCT GAACGCCGCG CTCGCGCAGC CTGCGCCGGT GCTGGTGGTG 
GCGCACGGGG GCACGCTCTA TGCGCTGGCG GCGCTGATCG GCCTGCCGAT CGACCTGGCC 
CTGCTCGGCA ATGCGCAGCC ATTGCGTTTT TCGCGCAGCG GCCCCACATG GACCGTGACG 
CCGCTGCTGC GGCATGCCGA CGGCGGCTCG AGCCTGGCCT GA
 
Protein sequence
MSKAPFPHGA APGLDQLVRI AAGQPLSPAC DHFYFLRHGQ TGRNAQRIFQ AVDEPLSELG 
LQQAARAAQL LAGEPIRTIV CSDARRAHDT AHAVATVLRL EPTPQAGLRE RNFGALIGTS 
SAEIDWACEP EGGETLAQFV ARKRLALNAA LAQPAPVLVV AHGGTLYALA ALIGLPIDLA 
LLGNAQPLRF SRSGPTWTVT PLLRHADGGS SLA