| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3203 |
|---|
| Symbol | |
|---|
| ID | 7973436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 3377394 |
|---|
| End bp | 3378326 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644793788 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002945087 |
|---|
| Protein GI | 239816177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.357564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC TCGCCCTCGA TCCCGTCGTC GACACGCCGA TCGGCCCGCC GCCGCCCGCA
CCCGACGTGC CCATTCCCGT GCCGCCGCCA CCGCCGCCCG GGCCCCCGCC CGAGGGCGAT
CCGCCGCCCG TGGAGCCGCC GTTCACCGAC CCCGGTTTTC CGCGGCCCGT GATCGATCCT
CCGCCGCCCA TGCAGAAGGC CGGCGAGGTG CCGTTCGGCA AGCTGCATGC GCGGCGGCTG
CGCGAGATCT ACCGTTCGGC GGGCTGGCCC TGCTGCGACG CCATCGAGGT CGAGCTGCTC
GCGGGCGGGT TCCTCGAGCG CGTGCGCACG CCGCATGGCC ACGAGACCCT GCGCGTGACC
GATGCCGGCA TTGCGCGCAT TGCCACCACG CTCACCCTCA ACCGCGCGGC GCTCTCGCCG
CACGAGTCGC TGGTCGAGCG CGTGGCGCGC GAAATGACGC GCGGCGGCCG CATCGCCTGG
CGCGGCCTCG GCCTGCGGGC ACGCCTGCCG CCGCTCGAAG AGGGCGGCAA GCCGCGCTGG
TGCATCGCCA GGCCCGACGT GTTCTCGATC CGCAATACCA GCGTCGAGGC CTATGCGCAC
CCCATCGTGC ACGAGGTGAA GGTGAGCCGC GCCGACCTGC TGGGCGACCT GCGCAAGCCC
GACAAGCGCG CGGCCTACCT CGACCTGGGC GGCGAGTGCT GGTACGTGCT GGGCAACGAT
GCGCGCGGCC GCTGCATTGC CTCGCCCGAC GAGATTCCGC CAGAGTGCGG CGTGCTCGTG
CTCGAAGGCG AAAGGCTGGT GGTGGCGCGC GCCGCCGTGC ACCGCGCCTT CGATCGCATT
CCGTTCGGCG TGTGGCTCGC GCTGGCCAAG GCCCAGCCGA TCGCGGGCTT CGACGACGAC
GCGCAGGACC TGCTGGGCGA GCCCGGCGCC TAG
|
|---|
| Protein sequence | MPALALDPVV DTPIGPPPPA PDVPIPVPPP PPPGPPPEGD PPPVEPPFTD PGFPRPVIDP
PPPMQKAGEV PFGKLHARRL REIYRSAGWP CCDAIEVELL AGGFLERVRT PHGHETLRVT
DAGIARIATT LTLNRAALSP HESLVERVAR EMTRGGRIAW RGLGLRARLP PLEEGGKPRW
CIARPDVFSI RNTSVEAYAH PIVHEVKVSR ADLLGDLRKP DKRAAYLDLG GECWYVLGND
ARGRCIASPD EIPPECGVLV LEGERLVVAR AAVHRAFDRI PFGVWLALAK AQPIAGFDDD
AQDLLGEPGA
|
|---|
| |