| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3192 |
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| Symbol | |
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| ID | 7973425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3366148 |
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| End bp | 3367128 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793777 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002945076 |
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| Protein GI | 239816166 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCT ACGTTGCTGG TCATCGCGGC ATGGTGGGGC AGTCGCTCGT GAAGCGCCTG
GGCAGCCTCG GGCACGAGGT CGTCACGCGC AGCCACGAGG AACTCGATCT GCTCGACCAG
GAGGCCGTTC GCCGTTTCTT CGCCACCGAG CGCGTCGACC AGGTGTACCT GGCGGCAGCG
AAGGTCGGCG GCATCCACGC CAACATGACC TATCCGGCGG AGTTCATCTA CCAGAACCTG
CTGATCGCCG CCAATGTCAC GCACCAGGCC TTCCTTGCGA ACGTCAAGCG CCTGCTGTTC
CTCGGCTCCA GCTGCATCTA TCCACGGATC ACCGAGCAGC CGATCCGCGA GGACGCGCTG
CTCGGCGGCC AGCTCGAGCC CACCAACGAG CCCTATGCCA TCGCCAAGAT CGCCGGCATC
AAGCTGTGCG AGAGCTACAA CCGCCAGTAC GGCGCCTCGC ACGGCATCGA CTACCGCAGC
GTGATGCCGT GCAACCTGTA CGGCCCCGGC GACAACTACC ACGCCGAGAA CAGCCACGTG
GTGCCGGCGC TGATCCGGCG CTTCCACCTT GCCAAGACCA CCAATGCGCC CGAGGTGCTG
ATCTGGGGTA CGGGCCAGGC CAGGCGCGAG TTCCTCTACG TGGACGACAT GGCCGAAGGC
TGCACCACCG TGATGGGCCT GAGCCGCGCG GGCTACGAGC AGCACACCAC GCCGATGTGC
GCCCACATCA ACCTGGGCAT GGGCGAGGAC CAGACGATCG CCGAGCTGGC GCGGCTGGTC
GGCGAGGTCG TGGGCTACCG GGGCCGCATC CGCTTCGATC CCTCGCGGCC GGACGGCGCG
CCCAGGAAGC TGCTCGACGT GTCGTGCGCC GCCGCCATCG GATGGCACCC CACGGTGTCG
CTGGCCGAGG GCTTGCAGCG CACCTATGCG GACTACCAGA AGTCGCTGCA GCCCGCCGCG
CAGGAACTGG CGCACGCCTG A
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| Protein sequence | MRIYVAGHRG MVGQSLVKRL GSLGHEVVTR SHEELDLLDQ EAVRRFFATE RVDQVYLAAA
KVGGIHANMT YPAEFIYQNL LIAANVTHQA FLANVKRLLF LGSSCIYPRI TEQPIREDAL
LGGQLEPTNE PYAIAKIAGI KLCESYNRQY GASHGIDYRS VMPCNLYGPG DNYHAENSHV
VPALIRRFHL AKTTNAPEVL IWGTGQARRE FLYVDDMAEG CTTVMGLSRA GYEQHTTPMC
AHINLGMGED QTIAELARLV GEVVGYRGRI RFDPSRPDGA PRKLLDVSCA AAIGWHPTVS
LAEGLQRTYA DYQKSLQPAA QELAHA
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