| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3157 |
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| Symbol | |
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| ID | 7974367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3319693 |
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| End bp | 3321006 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793741 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002945041 |
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| Protein GI | 239816131 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.447147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGCA AGAACTTTCG TTGGTACGGC GTCGCCACGC TGTTCGTGAT CGTCGCGATC
TCCTACGTGG ACCGCATCAA CATCGCGGTG CTGATCACCG ACGCCGCGTT TCTCAGCCAC
GCGGGCATTG CCGCTTCCGA CCGCGTGAGC CAGGGTTTTT TGGCCACGGC CTTCATGCTG
GGCTACGGCG TATCGGCCTT CGTGCTCACG CCGTTCTGCT CGGCCTTGTT CGGCGTGCGC
CGCAGCCTGG TCTACGGCCT CATCTTGTGG GGCGTGGTGA CCTGGGCCTC GCCCCTGTTC
GACAGCTACG GCCTGCTGCT GGCCTCGCGC GTGCTGCTGG GCGTGTCGGA AGGACCGCTG
TTCTCGCTCG CGTCGTCCTA CATCAAGGCG CACTTCAGGA GCGACGAGAA CGGCAAGCCC
AATGCGCTCG TGAACATGGG CACGGGGCTC GGGCTGGCGG TGGGCTATCC GCTGGTGGGC
TACCTGCTCA CGCGCTTCGC GTGGGACAGC TCCTTCCATG TGCTGGGGGT GCTCAACATC
GCACTGGGCA TTCCGCTGGT GCTGGCCTTC GTGCGCATGC CGGCGGGGCA TGAAGACGGG
GCCAGGCCGT CTTCCCTTGG CGAGGCGATG GCGCGCGTCG GCGGCATCGT GCGGGGTGCG
CTGCACACGC GCAACCTGTT CATCATCACG CTGCTCACTT CGGCGGCGCT GGCCTATCTC
TGGGGCAGCA GCAACTGGCT GCCGACCTAC CTGCGCGAGG CGCGCGGCTT CTCGCTGCGC
GAGATGGGCT GGATCGCGTC GGCGCCGCAG TACGCCACGG TGCTTGCGGT GTTCGTGGGC
GGCGTGCTGA TCGACAGGCT CGGGCGCGAC CGCGTGCCGT TCATCTTCAT GGGCGCGAGC
GCGGGCGTGG CGCTGTCGGT GCTCATGGCC ATCAACGCAC GCGATCCGTA TGCGGCCGCA
TGCTGCCTGG TGGCGGCCAA TTTCTTCTGG GGCCTGCAGA GCCCGGCCAT TCCGAGCACG
GTGCAGCATT GCTCGCGGCC CGAGCACACG GCCAGCGCCT TCGGCGTGAC GAACGGCGCG
GGCAGCCTGG TGGCGGCCTT CATGCCGGCG CTGATGGGCG GCGTGATCAG CGCGGTGTCG
CATGGCGGCG GCGCGGGTGC GGCCGTCACC GCAGCTTCGT CGGCGGCGGG CTTCTTCGCG
GGCTTTGCGC TGCTCATCGG CACGCAGGCG GTGGTGTTCG CCTGCGGACT GCTGCTGTGG
TGGCGCGAAC GCGCGCAGCG CATGACTGCA GTCTCTGGTT CACAGCTTTC GTAG
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| Protein sequence | MHSKNFRWYG VATLFVIVAI SYVDRINIAV LITDAAFLSH AGIAASDRVS QGFLATAFML
GYGVSAFVLT PFCSALFGVR RSLVYGLILW GVVTWASPLF DSYGLLLASR VLLGVSEGPL
FSLASSYIKA HFRSDENGKP NALVNMGTGL GLAVGYPLVG YLLTRFAWDS SFHVLGVLNI
ALGIPLVLAF VRMPAGHEDG ARPSSLGEAM ARVGGIVRGA LHTRNLFIIT LLTSAALAYL
WGSSNWLPTY LREARGFSLR EMGWIASAPQ YATVLAVFVG GVLIDRLGRD RVPFIFMGAS
AGVALSVLMA INARDPYAAA CCLVAANFFW GLQSPAIPST VQHCSRPEHT ASAFGVTNGA
GSLVAAFMPA LMGGVISAVS HGGGAGAAVT AASSAAGFFA GFALLIGTQA VVFACGLLLW
WRERAQRMTA VSGSQLS
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