| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3085 |
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| Symbol | |
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| ID | 7974294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3241244 |
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| End bp | 3242290 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793669 |
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| Product | beta-ribofuranosylaminobenzene 5'-phosphate synthase family |
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| Protein accession | YP_002944970 |
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| Protein GI | 239816060 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1907] Predicted archaeal sugar kinases |
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| TIGRFAM ID | [TIGR00144] beta-RFAP synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCCG CCGATCTCGC CATTGCTTCC AGGCTCGACC AGGGCGTTCG CACCGTGAGC
GTGAGCGCGC CCGGGCGCCT GCACCTCGGT TTTCTGGACC CCTCGGGTTC GCTGGGACGC
GCGTTCGGCA GCCTGGGGCT GGTGATCGAC GGCTTCACCA CCGATCTCGA ACTGTCGGCG
TCCGCGTCAT CGGACCAGCT GTCGGCCGAC ACGCCGGCCG GCGGGGCGGA GCTGGCCCGC
GCGGCGGACT ATCTGGCGGT GTTGAAGCAG CGCAGCGGCC GCCACGCGCC GCTGTCGCTG
CGGCTGCGCC ATGCACTGCC GCCGCATGCG GGCTTCGGTT CGGGCACGCA GCTGGCGTCG
GCGATCGGGC GGGCCTTTGC CGAATGGCAT GGGCTCGATC TGGACACAGG CACGCTGGCG
CACTGGCTCG GGCGCGGCCT GCGCTCGGGG ATCGGCATTG CGGGTTTCGA CAGCGGCGGC
CTGCTGCTCG ATGGCGGCCC GGGCGCCGAC GGGCTGCCCG CACCGCTGCT GTCGCGCATC
GAGTTTCCGG AGGAATGGCG CGTCATCGTG GTCCAGGACC CCACGCACAA GGGCCTGTCG
GGCGGCGCGG AGAAGAAAGC TATTGCGGCC TTGCCGCCCC TGCCGCAAAC GGCCGCGGCC
GAGATCTGCC ACCAGGTGCT GATGCGGGTG CTGCCCGGCG CCGCGCGCGC GGAGTTCGCG
CCGTTTGCCG CGGGCATCAA CCGCATGCAG CAGCTGCTCG GCGAGCACTT CGCGCCGGCG
CAGGGCGGCA TCTACACGAG CGCTGCGGTC GGGCGGCTGA TGCACTGGTT CGCGGATGCG
AGCCGCGGGC ATGACGCGGC CATCGGCCAG AGCTCGTGGG GCCCCACGAG TTTTGCGATC
GTGCCTTCGC ACGTGCGGGC CGAGATGCTG GTCGATGCGG CGCGTGCCTC CGGGCAGCTC
GATCCGCGGC TGGAGCTGCG CATCGTCTCG GGCCGCAACC GCGGGGCGGT GGTGCGCGGC
CGTGCCGCCG AATCGCGCAA CCGCTGA
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| Protein sequence | MISADLAIAS RLDQGVRTVS VSAPGRLHLG FLDPSGSLGR AFGSLGLVID GFTTDLELSA
SASSDQLSAD TPAGGAELAR AADYLAVLKQ RSGRHAPLSL RLRHALPPHA GFGSGTQLAS
AIGRAFAEWH GLDLDTGTLA HWLGRGLRSG IGIAGFDSGG LLLDGGPGAD GLPAPLLSRI
EFPEEWRVIV VQDPTHKGLS GGAEKKAIAA LPPLPQTAAA EICHQVLMRV LPGAARAEFA
PFAAGINRMQ QLLGEHFAPA QGGIYTSAAV GRLMHWFADA SRGHDAAIGQ SSWGPTSFAI
VPSHVRAEML VDAARASGQL DPRLELRIVS GRNRGAVVRG RAAESRNR
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