| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3083 |
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| Symbol | |
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| ID | 7974292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3239110 |
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| End bp | 3240252 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793667 |
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| Product | protein of unknown function DUF201 |
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| Protein accession | YP_002944968 |
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| Protein GI | 239816058 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2232] Predicted ATP-dependent carboligase related to biotin carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACGA TCGCCGTTGC CGCCATCTCC GCGCGTGCCA TGGCCGAGGC GGCGGCCAGC
GAGGGCTTCA AGGTGATTGC GCTCGATCTG TTCGGCGATG TCGACACGCG CCGCGCGGCT
TCGCGCTGGC TGCCGATTGG CGCACCCGGC AGTTTGCAGA TCGATGCGGC CAGCGTGGTG
GCTGCGTTGC GCACGCTCGC AAAGGACAGC GAACCGGTGC AGGGCTGGAT TGCAGGCAGC
GGCTTCGAGG GCGAGCCCGA TCTGCTCGAA GAGGGCGCGG CCGTGCTGCC GCTGATCGGC
ACCGCGCCCG CGGCCGTGCG CCGCCTGCGC GATCCGGCGG CCTTCTTCGG CTTTCTTGCT
GCGCAGGTCA TCCCATTTCC GCAAGTGCTG CTGCAGCCGC CCGAGGACCC CGCGGGATGG
CTCATGAAAG ACGCGCACGG CTGCGGCGGC TGGCATGTGC GCCATGCGCC GTGGTCGATC
GACGAGCCGC CGTCTTCGCA CCACTACTTC CAGCGCGAAA TGGCCGGGCT GCCGATGTCG
GCCACTTTCA TCGCCAATGG CCGCGATGTG CATGTGCTCG GCTTCAACGA GCAGACCGTG
CGCCGCTTCG GCACGCGGCC CTTCGTGTTC TGCGGTGCCG TCGGGCCGGT GCCCGTGGCA
GAGGACATCG CGCGCCGCGT GACGGCCATT GCGCGCGCTC TGGCCGTGGA GTTCGAACTG
CGCGGCCTGT GCAGCCTCGA CTTCATGCGC GACGGCGACG CCATCGGCGT GCTGGAGGTC
AATCCGAGGC CGCCGGCCAG CATGAGCCTC TACAAGGCGC CCGCCGGTTC GCCGGGCGTG
ATGCAGGCGC ATCTGCGTGC CTGCCTGCAT GGCGAGCTGC CGCCGCCGGT GCCATCGCAT
GCGCACGAAG TCGAAGGCAT CGAGATCGTG TTCGCGCGGC AGCCGCTGCA GCTCGGCGCG
GCTGCGGCGC AGCGCCTGGC TGCATGGCCC GGCATCCGCG ACCTGCCCGA GGCCGGCCAG
CGCTTCGACA TCGACGACCC CGTGTGCACC CTGACCGCGA GCGGAAGCAG CGCGCAGCAG
GTGCGCACCC GACTGAACGA AGGCCGCGAG CGGCTGCTGC AATCACTGGA GACCAAGGCA
TGA
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| Protein sequence | MQTIAVAAIS ARAMAEAAAS EGFKVIALDL FGDVDTRRAA SRWLPIGAPG SLQIDAASVV
AALRTLAKDS EPVQGWIAGS GFEGEPDLLE EGAAVLPLIG TAPAAVRRLR DPAAFFGFLA
AQVIPFPQVL LQPPEDPAGW LMKDAHGCGG WHVRHAPWSI DEPPSSHHYF QREMAGLPMS
ATFIANGRDV HVLGFNEQTV RRFGTRPFVF CGAVGPVPVA EDIARRVTAI ARALAVEFEL
RGLCSLDFMR DGDAIGVLEV NPRPPASMSL YKAPAGSPGV MQAHLRACLH GELPPPVPSH
AHEVEGIEIV FARQPLQLGA AAAQRLAAWP GIRDLPEAGQ RFDIDDPVCT LTASGSSAQQ
VRTRLNEGRE RLLQSLETKA
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