| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3062 |
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| Symbol | |
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| ID | 7973782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3218467 |
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| End bp | 3220359 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793646 |
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| Product | para-aminobenzoate synthase, subunit I |
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| Protein accession | YP_002944947 |
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| Protein GI | 239816037 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
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| TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTTCGT TCGCGCTCCT CGACGACTGC GGCTCGACGC CCGCGCGGCC CACCAGCCGG
CTGCACACCG GCTTCGTGCG CGAGCACCGC TGCGCGGATC CGGCCGAGCT CGATGCGGCC
TGGGCGCGCG TCGATGCCGA CCTGCGGCAG GGCCTGCACG CGGTGCTGCT GGCCGACTAC
GAATGGGGCG CCAGGCTGCA GCGCGCGGGG CATGCACGGC TTGCGACCGA CGATGCCTCG
GCGCTGCGCG TGCTGATGTT CCGCGACTGC GCCATGCTTT CGGCGGACGA GGTTGCCAGC
TGGCTGGAGC AGCTCGAGGC GAGCGAGGCC AACCCGCCGC AGCCCGTCGG CGTGATGGAC
CTGCTGCCCA GCATCGACGC GCCGGCCTTC ACCGAGGCCA TCGCGCGCAT TCACGGCGCC
ATCGCCGCGG GCGAGACCTA CCAGGTCAAC TTCACCTACC GGCTGCACGG CCAGGGCTAT
GGCTCGCCCG TGGCGCTGTA CCGGCGCCTG CGCGAACGCC AGCCCGTGGC CTACGGCGCG
CTGATCGCCC TGCCCGAAAG CAATTCAAAG GCGGGGGAGG GCGAGGCCAC CCACGTGCTC
TCGTGCTCGC CCGAACTCTT CCTGCGCCAC GATGCGGGCG TGCTCACCGC GCGGCCGATG
AAGGGCACCG CGGCCCGCGC CGATGCGCCC GAGGGCGACA GCGAAAGGGC GCGCCTGCTC
TCGGTCGACA CCAAGAACCG CGCCGAGAAC GTGATGATCG TCGACCTGCT GCGCAACGAC
ATCGGCCGCG TGGCGCAGAT CGGTTCCGTC AAGGTGCCGA CGCTCTTTGC CATCGAGCCC
TATGCCACGG TGTTCCAGAT GACATCGACC GTAGAGGCGC GGCTGCGCGC CGGCGTCGGC
ATGCCCGAAC TGCTGCGCGC GGTGTTCCCC TGCGGCTCCA TCACGGGTGC GCCCAAGCAC
CGCACCATGG AATGGATCGG CGAACTCGAG AGCACGCCGC GCGGCCTCTA CTGCGGCGCG
ATCGGCTGGA TCGATGCGCC CGCGGAGGGC GCGGCCATCG GCGACTTCTG CCTGTCGGTC
GCCATCCGCA CCCTCACGCT GGGCGCGCAG CAGAAGGGCC TGCGGCCGCT GCGGCTGGGC
ATTGGCGCGG GCATCGTGCA GGACAGCGTT GCGGCCGACG AATTCGAGGA GTGCCTGCTC
AAGGCACGCT TTCTCACCGC ACTCGATCCG GGCTTCGAGC TGTTCGAGAC CATGCTGGCC
ACGCCCGGTG AGGGCATCCG CTACCTGGAC CGGCACCTGG CGCGGCTGGC GCACAGCGCA
CGCGCGCTGG GCTTCCGGCT CGACCGCGAT GCCGCGATGC AGGCGCTGCG GGAGGCCTTG
CCCGCGCTCG CACCGGGCCA GCCTTCGCGC CTGCGGCTCG CGCTGGCGCA CGGCGGGCGC
ATCGGCATCA CGCATTCGCC GCTGCCGCCC TTGCCGCCGG GCGCAGTGAA GCTGCTGATC
GCCGACCAGC GGCTGCCCAA TGCGAACCCG CTGGCGGCCC ACAAGACCAC CGTGCGCCAG
CACTTCGACG CCGGCGTGCG CGCGGCCGAA CGCGCCGGCG CCTTCGACAG CCTGTTCTTC
ACCGAAGACG GCCGACTTGT CGAAGGCGGG CGCAGCACGG TGTTCGCGCG CATCGGCGGA
CGCTGGTGGA CGCCGCCCGT TTCCGATGGC GCGCTGCCCG GCGTGATGCG CGGCGTGCTG
ATCGAAGACT CGATCTGGGA GGCCACCGAA CGCAGCCTGT CCCGTGAAGA CCTGGAGGCC
GCGCAGAAGC TCGTGGTATG CAATGCGCTG CGCGGCGTAC TGCCGGCGCG GCTGGTTCAG
CAAGCGCAGC CGCACGAGGC GGCCGCCGCT TGA
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| Protein sequence | MPSFALLDDC GSTPARPTSR LHTGFVREHR CADPAELDAA WARVDADLRQ GLHAVLLADY
EWGARLQRAG HARLATDDAS ALRVLMFRDC AMLSADEVAS WLEQLEASEA NPPQPVGVMD
LLPSIDAPAF TEAIARIHGA IAAGETYQVN FTYRLHGQGY GSPVALYRRL RERQPVAYGA
LIALPESNSK AGEGEATHVL SCSPELFLRH DAGVLTARPM KGTAARADAP EGDSERARLL
SVDTKNRAEN VMIVDLLRND IGRVAQIGSV KVPTLFAIEP YATVFQMTST VEARLRAGVG
MPELLRAVFP CGSITGAPKH RTMEWIGELE STPRGLYCGA IGWIDAPAEG AAIGDFCLSV
AIRTLTLGAQ QKGLRPLRLG IGAGIVQDSV AADEFEECLL KARFLTALDP GFELFETMLA
TPGEGIRYLD RHLARLAHSA RALGFRLDRD AAMQALREAL PALAPGQPSR LRLALAHGGR
IGITHSPLPP LPPGAVKLLI ADQRLPNANP LAAHKTTVRQ HFDAGVRAAE RAGAFDSLFF
TEDGRLVEGG RSTVFARIGG RWWTPPVSDG ALPGVMRGVL IEDSIWEATE RSLSREDLEA
AQKLVVCNAL RGVLPARLVQ QAQPHEAAAA
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