| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3054 |
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| Symbol | |
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| ID | 7973774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3212425 |
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| End bp | 3212718 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793638 |
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| Product | coenzyme PQQ synthesis D |
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| Protein accession | YP_002944939 |
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| Protein GI | 239816029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGCGA ACACGACCAT GCTCAGCGCC GAAAGCAAAC CCCGCGTCGG CCCCGGCTTC
CGCCTGCAGT GGGAGCCGGC GCAGGAATGC CATGTGCTGC TCTACCCCGA GGGCATGGTG
CGGCTCAACG GCAGCGCGGG CGAGATCATG AAGCGCTGCG ACGGCGAGCG CAGCGTCGCC
GCCATCGTGG CCGACCTGGA GCAGGCCTTC GACACCACCG GGCTTGAACC CGAGGTGCGC
GGCTTCGTCG AAATGGCGGC GCAGCAGAAC TGGCTGCGCT GGGACCCCGC ATGA
|
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| Protein sequence | MTANTTMLSA ESKPRVGPGF RLQWEPAQEC HVLLYPEGMV RLNGSAGEIM KRCDGERSVA
AIVADLEQAF DTTGLEPEVR GFVEMAAQQN WLRWDPA
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