| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3048 |
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| Symbol | |
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| ID | 7973768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3206926 |
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| End bp | 3207801 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793632 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944933 |
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| Protein GI | 239816023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCG TCGACGAATT CCACTACCAG CTGCCGCGCC GCTTCGGCGG CTGGCGCCCT
GGCGCGCAGC GCGGCCTGAG CCAGGGCAGC GGGCAGGAAT TTGCCGCGCA CCGGCGGCTG
TTCGACCACC CCGACCCGCG CCGCATCGAC CTGCGCGCGA GCCTGCGCGA GGGCCGCGGC
GACTGGCTGG TGCGCATCCA CCGGCTGCGC GTGGCGATTC CGGTGCACGT GGTGGTCGAC
GTGTCGGCCT CGATGCATTT CGGCGCCGAG CGGCGCAAGC TCGACGTGGT GGCCGACCTG
GTCGAGGCGC TGGGCTACAG CGCGTTTCGC GCCGGCGACA CCGTCGGCCT GCTGGCCTTC
GACCAGCGCG AGCGCGAAGA TCTTTTCGTG CCCGCGCGCC ACAGCCGCGG CAACGGCAGC
CTGATGGCGC GGATGCTGCG CGAATGCGAT GCGGCTTCCG GCGCACCGCC CACGGACGAC
AGCGCCCTCT CGGGCCTGCG CCGCGCCACC GAGCGGCTGG TGGGCCGCGG CGGGCTGGTG
TTTCTCGCGT CCGACTTCCA CTGGCCGATC GGCGCGCTCG GCGAGCTGCT CGAACAGTTC
TCGCCCGCTT GCGTCGTTCC GCTGGTGGTC TGGGACCCGG CCGAAATCGA ACCGCCCGAT
GCCCGCGCGC TGGTCGCCCT GCGCGACGCC GAGACCGGCG CGCGGCGCAG CCTGTGGATG
CGCGATTCGC TGCGCACGCG GTGGCGCGAA TCGGTCGCGG TGCGCCGCGC TGAACTCACG
GCGCTGTTCA ACGCGCACGG CATGCCGCCC TTTCACCTGC AGGGCCGCTT CGAGGCCGAG
GCGCTCACGC GCTATTTCCT GGAGACGGCG GCATGA
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| Protein sequence | MDRVDEFHYQ LPRRFGGWRP GAQRGLSQGS GQEFAAHRRL FDHPDPRRID LRASLREGRG
DWLVRIHRLR VAIPVHVVVD VSASMHFGAE RRKLDVVADL VEALGYSAFR AGDTVGLLAF
DQREREDLFV PARHSRGNGS LMARMLRECD AASGAPPTDD SALSGLRRAT ERLVGRGGLV
FLASDFHWPI GALGELLEQF SPACVVPLVV WDPAEIEPPD ARALVALRDA ETGARRSLWM
RDSLRTRWRE SVAVRRAELT ALFNAHGMPP FHLQGRFEAE ALTRYFLETA A
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