| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2995 |
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| Symbol | |
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| ID | 7971782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3151329 |
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| End bp | 3152222 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793580 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944881 |
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| Protein GI | 239815971 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAG ACATTCCCAA CCTGGGTGCC TTGCAGGCCT TCGAGGCCTC GGCGCGCCTG
GGGAGCTTCA CCCGCGCGGC GGCCGAACTC GCGCTCACGC AAAGCGCGGT CGGGCGGCAG
GTGGCCACGC TCGAGCAGCG GCTGGGCGTG GCGCTGTTCT CGCGCGTGCG GCGGCGCCTC
ACGCTCACCG ACACCGGGCG CGAGTACGCG GCGCGCATCC GCCGCCACCT CGACCAGATC
CGGCGCGACA CGCAGGAGAT CAGCGCCGGC CACGACATGG GCTTCGTGCT CGAAGTGGCC
GTGGTGCCCA CCTTCGCCAC GCAATGGCTG ATCCCGCGGC TGCCCGATTT CAGCCGGCGG
CACCCCAACA TCACCGTCAA TCTCTCGGCG CGCTCGCAGC CCTTCTCGTT CCAGGAGAAC
GCCTACGACG CGGCCATCTA TTTCGGCGAC CAGTTCTGGC CCGGCACCCA GGGCGGGCTG
ATCTTTTCCG AAGGCCAGAT GGTGCCGGTC TGCAGCCCCG CCTTCCGCGA TGCCAACGGG
CCGTGGGACG AATCGGCCTT CGAGCGCTGC CGCCACGTGC ACCTGGGCAC GCGCGCCCAT
GCCTGGCGCG ACTGGTATGC GCAGCAGGGC TGGGACTACA CGGTGCACGC CTCGCGCGGG
CCGCGCTACG AGCTCTTCAC CATGGTGACC GCCGCCGCGG CCGCCGGCAT GGGCGTGGGC
CTCGCGCCGC GCATCCTGAT CGAGCGCGAG CTGCGCACCG GCGAGCTCGT GATCCCGATC
GACCGGCACC TGGAGGTGCG CCAGGGCTAC TACTTCGCCT ACCCCGAGGG CCGGCCGGCC
TCCGGGGCGC TGGAGCACTT CGAGCGCTGG GTGCTTGGGC TCGCGCCGTC CTAG
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| Protein sequence | MRKDIPNLGA LQAFEASARL GSFTRAAAEL ALTQSAVGRQ VATLEQRLGV ALFSRVRRRL
TLTDTGREYA ARIRRHLDQI RRDTQEISAG HDMGFVLEVA VVPTFATQWL IPRLPDFSRR
HPNITVNLSA RSQPFSFQEN AYDAAIYFGD QFWPGTQGGL IFSEGQMVPV CSPAFRDANG
PWDESAFERC RHVHLGTRAH AWRDWYAQQG WDYTVHASRG PRYELFTMVT AAAAAGMGVG
LAPRILIERE LRTGELVIPI DRHLEVRQGY YFAYPEGRPA SGALEHFERW VLGLAPS
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