Gene Vapar_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2991 
Symbol 
ID7972267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3147930 
End bp3148181 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content58% 
IMG OID644793576 
Productpentapeptide MXKDX repeat protein 
Protein accessionYP_002944877 
Protein GI239815967 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.272043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC TCACTGCAAC CCTGTTCGCA ACCTGCATCG CCTTTGCCGG CGCCTCGGCC 
TTCGCCGCCG ACGACATGGC GAAGGACGGC ATGGCCAAGG ATTCCATGGC CAAGGACGGC
ATGAAGAAGG ATTCGATGGC GAAGGACGCC ATGTCCAAGG ACGGCATGAA GAAAGACGGC
ATGTCCAAGG ACGGCATGAA GAAGGACGGC ATGTCCAAGG ACGCGATGGG CAAGGACGAG
ATGAAGAAGT AA
 
Protein sequence
MNKLTATLFA TCIAFAGASA FAADDMAKDG MAKDSMAKDG MKKDSMAKDA MSKDGMKKDG 
MSKDGMKKDG MSKDAMGKDE MKK