| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2964 |
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| Symbol | |
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| ID | 7972240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3123395 |
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| End bp | 3124309 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793549 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944850 |
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| Protein GI | 239815940 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.232186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACC TCAACGACAT GGTTTTTTTC GCCGAAGTGG CCGAGCGCGG CGGCTTTGCC
GCGGCCAGCC GCGCGCTCGG CATTCCCAAG TCGCGCCTGT CGCGCCGCGT GGCGGAGCTG
GAAGACCGGC TCGGCGTGCA GCTGATGCAG CGCAGCACGC GGCGGCTGTC GCTCACGCCG
GCGGGCGAGA TCTTCCTGCG GCATTCGGCC GCCGTGCGCG ACGCGGCGCA GGCCGCGACC
GAGGCGGTGG CGCAGGTGCA CACCGATCCC TGCGGCACGG TCCGCCTGAG CTGCCCGATC
ACCGTCGCCC ACAGCGGGCT CGCGCAGCTG CTGCCGCGCT TCATGGAGCG CTATCCGGCG
GTGCGCGTCG ACCTGCGCGT CATGAACCGG CCGGTGGACC TGATCGAGGA GGGCATCGAC
ATCGCGCTGC GCGTGCGCCC CGCCATCGAG GACAGCACCA CGCTCGTGGC CAAGGTGCTG
GGCACCAGCC GTGCCGTGCT GGTGGCCCGG CCGGATCTGC TGCAGCGCCT GGGCCCGGTC
CGCACGCCGG CCGACCTCGA GCGGCTGCCC ACGGCGGCCA TGTCGGCCAA CAGCGAGGGC
CGCAGCGAAT GGCGGCTCGA GGGCCCGAAC GGCGAGATCC ACGTGCACGT CCATACGCCG
CGCTGCGTGG CGGACGATCT CGTGACGCTG CAGCTGGTTG CGCTCGAGGG CGTGGGCGCA
ACGCTGCTGC CGGGCTACAT GTGCCGCGCC GACGTGGAGG CGGGCCGGCT CGTGCAGGTG
CTGCCCGGCT GGGGGCCGGC GCCCGTCATT GCGCACATGG TCTTTCCGCC GCGCCGGGCC
CTGGTGCCGG CGGTGCGCCA GCTGATCGAC TTCCTGGCGG AGCACATGAG CGGGAGCCAA
TCGGGCATGT ATTAG
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| Protein sequence | MQDLNDMVFF AEVAERGGFA AASRALGIPK SRLSRRVAEL EDRLGVQLMQ RSTRRLSLTP
AGEIFLRHSA AVRDAAQAAT EAVAQVHTDP CGTVRLSCPI TVAHSGLAQL LPRFMERYPA
VRVDLRVMNR PVDLIEEGID IALRVRPAIE DSTTLVAKVL GTSRAVLVAR PDLLQRLGPV
RTPADLERLP TAAMSANSEG RSEWRLEGPN GEIHVHVHTP RCVADDLVTL QLVALEGVGA
TLLPGYMCRA DVEAGRLVQV LPGWGPAPVI AHMVFPPRRA LVPAVRQLID FLAEHMSGSQ
SGMY
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