| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2962 |
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| Symbol | |
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| ID | 7972238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3122045 |
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| End bp | 3122620 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793547 |
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| Product | protein of unknown function DUF1234 |
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| Protein accession | YP_002944848 |
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| Protein GI | 239815938 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACTT CCGTGATCAT CGTGCCCGGC TGGCGCGACT CCGGGCCCGG CCATTGGCAG
AGCCTGTGGG AAGAGCGCAT TCCGGGCGCG GCGCGCGTGG TGCAGGACGA CTGGGCATCG
CCCAAGCGCG AGGCCTGGGT GGCCACGCTC GCCAGGCTGG TGCTCGAAAG CCCCGGGCCG
GTGGTGATTG CCGCGCACAG CCTGGGCTGC ATCGCCACGG CGCACCTGCC GGCCGAGGCG
GCGGCGCGCA TCCGCGGGGC GCTGCTGGTG GCGCCGGCCG ATCCGGAGCG CCGGGCCGTG
CTGTCGGACT TCGCGCCCGT GCCCTATGCG GCGCTGCCGT ACCGCAGCAT CGTGGTGGCG
AGCAGCAACG ATCCCTATTG TCCGATCCGC CTGGCCGGCG CGTATTCCCG CGCCTGGGGC
AGTGAGTTTG TCCGCATGCA GAATGCGGGG CATATCAACA TCGACTCGGG GCACGGAGAC
TGGCCGCTCG GCCTCGCCTT GCTCCAGTCG CTGACCGACG AGCCCGCCGC CTGGCCGGCG
GGCCGTGAAT TTTCAGAAAA CTTGGCAACC ACATGA
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| Protein sequence | MQTSVIIVPG WRDSGPGHWQ SLWEERIPGA ARVVQDDWAS PKREAWVATL ARLVLESPGP
VVIAAHSLGC IATAHLPAEA AARIRGALLV APADPERRAV LSDFAPVPYA ALPYRSIVVA
SSNDPYCPIR LAGAYSRAWG SEFVRMQNAG HINIDSGHGD WPLGLALLQS LTDEPAAWPA
GREFSENLAT T
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